Salmo salar (Atlantic salmon): 106599990
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Entry
106599990 CDS
T04363
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106599990
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
106599990
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
Ig_2
LRRNT
LRR_6
LRR_LRWD1
LRR_9
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
106599990
NCBI-ProteinID:
XP_014046797
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Position
ssa03:complement(38545603..38605398)
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AA seq
622 aa
AA seq
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MIGSLGPGVWSLTLWRWVSLWGPALLLVTIIALLPGSCQACPPRCECSAQIRSVSCQRRR
LTGIPEGIPTETRLLDLSRNRLRWVEMGDLAPYPHLEVVDLSENLIATLEPNAFVNLQSL
RVLQLRGNQLKLVPMGAFAKLGNLTTLDLSENKMVILLDYTFQDLRSLRHLEVGDNDLVY
ISHKAFSGLLGLEDLTIEHCNLTSISGQTLSYLRSLVTLRLRHLSIAALEDHNFRKLNNL
RGLEIDNWPYLEYISPLSFQGLDLSWLSITNSNITSVPSSSFRNLIHLTHLNLSFNPITT
LEPWAFRDLLRLKELIMVNTGLATVEPHSLGGLRQIRVLNFSSNELQTLEEGSFHSVNSL
ETLRVDGNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPEEVQGYSLSTFTDSALFDHFTC
QKPKIRNRKLQQVTAREGQPVSFLCSAVGEPAPNIMWISPQRRIITAKSNGRITVHPGGT
LEIRYAQVTDSGTYMCIASNAGGNDTYFAMLTVRGAPLDAASAFFANRSLYGGEFFNDTN
LNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFAWSRGRGQRKNNFTVETPFR
KAEGPAATGSAGGARKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgattggctccctgggccccggtgtgtggtccctgacgctatggcggtgggtgagtctc
tgggggccggccctgctactggttaccattatagccctgctgccaggtagttgccaggcg
tgcccgccgcggtgcgagtgctcggcccagatccggtcagtctcgtgccaacggcggcgc
ctcaccggcatcccagagggcatccctacggaaactcgcctcctggacctcagccggaac
cggctccgctgggtcgaaatgggcgacctggcaccatacccgcaccttgaagtggtggac
ttgagtgagaatctcattgccacgctggagcccaatgcgttcgtcaatctgcagagcctc
cgggtgttacagctgagggggaaccagctgaagctggtacccatgggggccttcgccaag
ctgggcaacctgaccacgctggacctgagtgagaacaagatggtgattctgttggactac
accttccaggacctgaggagtctgagacatctggaggtgggagacaacgacctggtctac
atttctcataaggccttttctggtctgctggggctggaggacctgaccatcgagcactgc
aacctgacgtccatctctggccagacactgtcctacctacgcagcctggtcactctgcga
ttacggcacctcagcatcgccgccctagaagaccacaacttccgcaagcttaacaacctg
cgggggctggagatcgataactggccctatctggagtacatctccccgctcagcttccaa
ggcctggacctgtcctggttgtccatcactaacagcaacatcacctccgtcccctcgtcc
tccttcaggaacctgatccatctcactcatctcaacctgtccttcaaccccatcaccacc
ctggagccctgggccttcagggacctgctgaggctcaaggagctgatcatggtgaacacg
ggcctagctacggtggagccccactccctgggaggcctcagacagatccgggtcctcaac
ttctcctccaacgaactccagaccctggaggagggatcattccactctgtcaacagtctg
gagacgctgcgggtggacgggaacccgctgctgtgtgactgccgtctgttgtggatcctg
cagagacgcaagaccctcaactttgacggcagggtgcccgtgtgcgctgggccggaggag
gtgcaggggtatagcctcagcaccttcaccgactcagcgctcttcgatcacttcacatgc
cagaagcccaagatacgcaaccgcaagcttcaacaggtgacagctcgtgagggccagcca
gtgagtttcctctgcagtgccgtgggagagcccgcccccaacatcatgtggatctcccct
cagcgccgaataatcacagcaaagagcaatggccgcatcactgtccacccaggagggacg
ctagagatccgctatgcccaggtcaccgacagtggcacctacatgtgcatcgccagcaac
gccggcggcaacgacacctactttgccatgctcaccgtccggggcgcgccgctggatgcc
gcgtcggctttctttgccaaccgctcgctatacggcggcgagttcttcaacgacacaaac
ctgaacagcacgcgcgtcttcctcaagttcaccctggacctgaccaccattcttgtctcc
acggctatgggctgcatcaccttcctaggcgtggtgctcttctgtttcctgttgttgttt
gcatggagcagggggcggggccagcgcaagaacaacttcacagtggagacccctttccgg
aaggccgaggggcctgcggccacgggtagtgccggaggggcccggaaattcaacatgaag
atgatatga
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