Salmo salar (Atlantic salmon): 106600026
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Entry
106600026 CDS
T04363
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106600026
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
106600026
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106600026
Nuclear receptors [BR:
sasa03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
106600026
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
106600026
NCBI-ProteinID:
XP_014046834
UniProt:
A0A1S3R519
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Position
ssa03:37981503..37998280
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AA seq
533 aa
AA seq
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MLVFQQLDIFLFCYTPHEVQFIDPETIIFNMRAQIEVIPCKICGDKSSGIHYGVITCEGC
KGFFRRSQQNNAMYSCSRQRNCLIDRTSRNRCQHCRLQKCLVLGMSRDAVKFGRMSKKQR
DSLYAEVQKHQKNQECLNQGLSLSSEDVAGGEIKGDRHGKLSRSYCSGGSSSTLSDLDDI
AALPKLFDLPLTPQEAHEYCSLELQEDHGGSTGNTSNSSSPSSSSPISSNQNSPQQNLLD
VTDANGIKHEYQMLSHTHALLAHTHATLLETLPDDCTLMDIERITQSVVKSHLETSQYSS
DDLKRLTYNRMQYSPEETRNFQCESAESVWQQCAHHITNSIQYVVEFAKRITGFMDLCQN
DQIILLKAGCLEVLLIRMCRAFNATTNTMFFDGKFASAQLFKALGCDDLVSAVFDLAKGL
SRLQLTDEEMALFSAACLLSPDRPWLADSQKVQKLQAKVYLALQHSLHMSGAADEKLDQM
VSKLPIMKSICNLHIDKLEFFRLVHPETAYSFPPLYREVFGSEISLPDSTNNS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtctttcaacagttggacatatttttattctgttacacaccacatgaagtccaa
ttcattgatccagaaacgataatattcaacatgagagctcaaatagaagtaataccttgc
aagatctgtggggacaagtcctcaggaatccactatggagttattacctgtgaaggctgc
aaggggttcttccgccgcagccagcagaacaatgccatgtactcgtgttcccgccagagg
aactgtcttattgaccgaaccagccgcaaccgctgccaacactgcagactgcagaagtgt
ctggtgttaggcatgagccgggacgcggtgaagtttggccgtatgtctaagaagcagcgc
gacagcttgtacgctgaggtccagaagcaccagaagaaccaggagtgtctgaaccagggt
ctgtcactgtccagcgaagacgtggctgggggagaaatcaagggggacaggcacgggaag
ctcagtcgctcctactgcagcgggggctccagctccaccctgagtgacctggatgacatc
gcggcgctccccaaactgtttgacctccccttgaccccacaggaggcccacgagtactgc
agcctggagctgcaagaagaccacggcggaagcactgggaacacctccaattcttcatca
ccatcatcatcctcgcccatttcgtccaatcagaattctccccagcaaaatctactggat
gtcaccgacgccaatggaatcaaacacgagtaccagatgttgtcgcacacacacgcgctc
ctggcacacacacacgccacactgctagagacactgcctgatgactgcactcttatggat
atagagcgtatcacccagagtgtggtcaagtcccacttggagacgagtcagtacagctct
gacgacctgaagaggctgacatacaatcggatgcagtactcacctgaggagacccgcaac
ttccagtgcgagtctgcggagtctgtgtggcagcagtgtgcccaccacatcaccaattcc
atccagtacgtggtggagtttgccaaacgcattacaggcttcatggacctgtgtcagaat
gaccagatcattctgctcaaagcaggctgtctggaggtgctgttgattaggatgtgcagg
gcatttaacgccaccaccaacaccatgttctttgatggcaaatttgcctccgctcagctc
ttcaaagccctcggttgcgatgatctggtcagtgccgtgtttgacctggctaaagggctc
tcccgcctgcagctgaccgatgaggagatggctctgttcagtgccgcttgcctgctgtcc
ccagaccgaccatggttagccgacagccagaaggtccagaagctacaggcgaaggtctac
ctggctctgcaacacagtctgcacatgagcggggctgccgacgagaaactagaccagatg
gtatccaagctgccgataatgaagtccatctgtaatctccacatcgacaagctggagttc
tttcgtctggtccaccccgagaccgcatacagcttcccaccactctaccgggaagtgttt
gggagtgagatctctctccccgactctacaaacaactcctag
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