Salmo salar (Atlantic salmon): 106600066
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Entry
106600066 CDS
T04363
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagosome
sasa04814
Motor proteins
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106600066
09142 Cell motility
04814 Motor proteins
106600066
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106600066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106600066
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106600066
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
106600066
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
106600066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
Beta-prop_EML
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_DCAF4
Nbas_N
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
106600066
NCBI-ProteinID:
XP_014046881
UniProt:
A0A1S3R413
LinkDB
All DBs
Position
ssa03:complement(37317340..37326424)
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AA seq
634 aa
AA seq
DB search
MADKQDKSELKAELERKKQRLAQIREEKKRKEEEKNKKKDGSDSKREGEGGGVGAADDSS
DLEKKRREAEALLQSMGITPDIPNTKSVGSESGSQDSGDGNSRTLPWDPDPSTLQLHSDS
ELLGRGFRLGMAKVTQVDFPPKQMVSYSKETQTPADTQTHTQDKPAEEEEEEEEEMVDPK
PAEDSQEEKADEEEKQEDVPPKELTEEEKMHLLNSEEFMTFFDRGSRIVERALSERVDVC
FDYSGRDLEDKEGEMQAGAKMSLSRVFSDERWSKNRVVTCLDWSPQYSELLVASYNNNED
APHEPDGVALVWNMKYKKTTPEYTFHCQSAVMSAAFARFHPNLIVGGTYSGQIVLWDNRS
NKRTSVQRTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWNLDMLSQPQDSLEL
VFKQSKAVSVTSMAFPLGDVNNFVVGSEDGSVYTACRHGSKAGISDVFEGHHGPVTGLSC
HSAGGPVDFSHLFISASFDWTVKLWTTKSTRPLYLFEDSCDYVYDVMWSPTHPALFACVD
GSGRLDLWNLNNDTEVPSASVVVDGSPALNRVRWAHSGREIATGDSDGQVLVYDVGEQIC
VPKADEWTRFVRTLVEINENRDEGDELAAQRLLA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaacaggataagagtgagctgaaagcagagctggagaggaagaaacagcgc
ctggcccagatcagagaggaaaagaagagaaaagaggaagagaagaacaagaagaaggat
gggtctgactctaagcgggaaggggaagggggtggagtaggtgcagcagatgactcttct
gacctggagaagaagaggagagaggctgaggctctgctgcagagcatggggatcacccct
gatatacccaacaccaagtcagtgggcagcgagtctggaagccaggactctggagatgga
aactctaggacgttaccctgggatcctgacccctctactctgcagctgcactctgactct
gaactactggggcgaggttttaggcttggcatggcaaaggtgacccaggtggatttccct
ccaaaacagatggtgtcctactccaaggagacacagacccccgccgatacacaaacacac
acccaggataaaccagcagaggaggaggaagaagaggaggaggagatggtcgatcccaag
ccagcagaggactcccaggaggagaaagctgatgaggaggagaagcaggaagacgtccct
cccaaggagttgactgaagaggagaagatgcacctgctcaactctgaggagttcatgacc
ttcttcgatcgagggagcaggattgtagagcgggctctctctgagcgagtggacgtctgc
ttcgactacagtggccgagacctggaggacaaggagggtgagatgcaggcgggggctaag
atgtctctgagtagggtgttctctgacgagcgctggtccaagaacagagtagtcacctgt
ctggactggtctcctcagtactctgagctgctggtggcctcctacaacaacaatgaagat
gctccacatgagccggacggagtggctctggtctggaatatgaagtataagaagaccaca
cctgaatacaccttccactgccagtctgcggtgatgtcagcggcgttcgccaggttccat
cctaacctgattgtgggtgggacttactcaggccagatcgtcctgtgggacaacagaagc
aacaaaagaacatctgtacagagaactcccctgtctgcatccgctcacacgcacccggtg
tactgtgtgaacgtggtcgggacccaaaacgctcacaacctcatcagcatctctactgac
ggaaagatgtgttcttggaacctagacatgctgtctcaaccacaggacagtctggagctg
gtgtttaagcagtctaaggcagtatcagtgacctccatggcgtttcctctgggtgatgtc
aacaactttgtggttgggagtgaagatggatcagtctacactgcctgccgccacgggagt
aaggcaggcatcagtgatgtgtttgagggacaccacggtccagtcactggactgagctgt
cacagtgccgggggccctgtggatttctcccatctcttcatctctgcttccttcgactgg
accgttaagctgtggaccaccaagagtacccgtcctctgtatttgtttgaggacagctgt
gactatgtgtatgatgtcatgtggtctcccacacaccccgccctcttcgcctgtgtggat
ggatctggacgcctggacctgtggaacctcaacaacgacacagaggtgcccagtgccagt
gtggttgtggatgggtctcctgctctgaaccgtgttcgctgggctcactcagggagagaa
atcgctacaggagactcagacgggcaggtgctggtctacgacgtaggagagcaaatctgt
gtgcccaaggcagatgagtggacccgttttgtgcgcacgctcgtggagatcaacgagaac
cgagacgaaggagacgagctcgccgcgcagcgcctactcgcctga
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