Salmo salar (Atlantic salmon): 106600304
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Entry
106600304 CDS
T04363
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8-like
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106600304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106600304
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106600304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
RcpB
Chromo_MIT1
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
106600304
NCBI-ProteinID:
XP_014047084
UniProt:
A0A1S3R3Z4
LinkDB
All DBs
Position
ssa03:complement(35212328..35236625)
Genome browser
AA seq
2592 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDALPGDAFTQGSSDPVEEALKLALGQIEPPYEPTPALSIPVAA
PTIPDPVPVQQQAPVPFTLPQTVSIASTVPQTTLSVASNTSRAATVLLGSPLTVNSSAGT
TQQITTQQFTTQQLAQIAQQLTPQQLAAITQQAGGQGGSKIVILKGPGGHAQVLQTVPGT
GSQAGKVTFARVLSGTQLRPGMQILSGGTVLNQASPGQGQVKVGTGIQRLVQSPNGPLKQ
VQLISMPQGQGQTQTVQMQIPQAQLAQAQQIQLQPQTQVQLQSTMQTQVTTTATGTTSVR
PQGVTLTTVPQQGEAKRITLVLQQPHGGTTQGGAVTVGGSGQLQQGQQQRLVLGNLPGKL
VLQGGQLAALTQARAGQTGAQPKVLTIQLQVQQQPNQQGGPKFQLVSGGQGSSPQVVQIS
QGQGGQRLAMPLKLLLQPQMSSTSTAGGTVSVVKVINTSAAGSAPSTTTTMASTGIRLAK
AQEPVRRVETLGKQEKANRIVAEAIARAKARGERNIPRVLNQDELPAGQKAADKGAAAMT
TGTPGAKKKGGGGGSKKKSPPGAGGKGMACAEKKGKAKAAGGAAVGTPVGVAGTSGSKSK
SKAKINTITLVGGKKRKRNASSDHSDGELSPSSPSKALEEDMLAKRRSNRQVKRKKYTED
LDIKITDDEDEPEEDVDVTTTAAVASITGGAAGQLMGEQLKQELQLDGDGLSSMQFFVEN
PNEEDAAIVDKVLSMRLTKKEVSPGHYINAEEFFVKYKNYSYMHCEWATLEQLERDKRIH
QKLKRFKIKHAQMRLLLQEEEEAFNPDYVEVDRILDESNSVDKDNGEPVVYYLVKWCSLP
YEDATWELREDVDEDKVEEFRKIQDRQPQLKRTPRPQAAAWKKLEEFTEYKSGNVLREYQ
LEGVNWLLFNWYNRQNCILADEMGLGKTIQSISLLSEVFGAGVQGPFLVIAPLSTITNWE
REFATWTDMNAIVYHGSLASRQMIQQYEMYCKDDKDHLIPGAYKFDALITTFEMILSDCP
ELREISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLE
PAQFSSESEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTD
VQKKYYRAILERNFSFLSMGATSNSNVPNLLNTMMELRKCCNHPYLITGAEESIVAELRE
VYDPMVPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRY
LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQ
NDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKESNVN
GQIQQFSKKEIEDLLRKGAYAAIMDEEDEGSKFCEEDIDQILQRRATTITIESEGKGSTF
SKASFVATENRTDIALDDPEFWQKWAKRADIDFDSMNRKNTLVIDTPRVRKQTRQFATLR
GEGGEISDPDSDDEYPPANSRQSRSSRRSERHAGNGYGRTDCFRVEKHLLVYGWGRWRDI
LSHARCKRRLGERDVETICRVILVFCLLHYRGDENIKSFIWELITPPENGREPHTLLNHS
GLSIPVPRGRKGKRVKAQSSFDVQKVEWIRKYNPDSLLLDDSYRKHLKHQCNKVLLRVRM
LYYLRQEVIGEHADSVLRGADARDIDIWMPEMEQQEVPSGWWDTEADRSLLVGVFKHGYE
MYTTMRADDCLCFLERAGRPDDQAIDAEQHSADAELGDGGDDDKYSEDPEFKPASRHTKD
LYEEADSMNMSDDICVDDKPGPVKTKGPPSGLSGACEWPTSSSLTARLRRLITAYQRSYK
REQLKVEAAEKGDRKRRRCEQASKLKEIARQERQQRYQLLPSAINSSSICVLNLRWTRRE
ECDFYRVVSTFGVERIKEPNAQEGEDAKLEWARFRTFARLDKKTDESLSRYFRCFMAMCR
RVCNLRPARGEDPSELGQSMAPITEERASRTLYRISLLRRLRERVLPHPSMEESLLLAPL
SSELPVWWSTPAHDRELMLGAALHGVSRTELSVFSDPQFSFSQARHDYLEIQQNQPAPAT
PLRQPQAEEGSAVKEEEGLNEESVLLGASEALGHSDTQTTPLSRPDGTGQARTGLGWKKS
KGRGPRSGGRKGGRSGGEGGTSDLDSESDSGSSTSSRRSESSDDSGDSDAERERAALKME
EDGENSLLSMTPSQDGAPPESLTDPFRVDWPKDRVLINRLDSLCTLVLSGQWPTGRRYAS
DAQLNPGSDDLGAGDELSFARLMRKGNSTPGGEGADGEESEFTVKLLKEEGLKLTFSKHA
LMSNGSGGEGSGRRKRRDQELSDPDGVVPVVDAMTGTVLSGERAPRRRDLPNWLKENPEY
EVEGDMLELLVNRSKRKKKRTEKAAALSGSEKINIIDMRSGKKVGAAHGPMLQDLREFLE
ENPDCAVAPEWAETVRCSGFLPDSLFHRLLSAHSVIPKRDRHHRHHHAPQPDPMEDPLLG
GGEEETLVSDGAYMMEDEDLEDSSFLTQAFDVKMEGGDSLSRGGYESSDREALLDDVIMA
QKDTDSSSSSED
NT seq
7779 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctctttgatgacacgccgctgttcaacctggatgctctg
ccaggcgatgccttcacccagggttcctcagaccctgtggaggaggctctgaagctggct
ctggggcagattgaacccccctatgaacccaccccagctctcagcataccagtggcagct
ccaaccatcccagacccagtccctgtgcagcagcaggccccagtcccattcaccctccct
cagactgtttcaatcgcgtcaacagtacctcagacgacactctctgtagccagtaacact
agtcgggctgccacagtcctgctgggctcacctctgactgtcaatagctctgctggcacc
acacaacagatcacaacacaacaattcaccacacagcagctcgcacagatcgcacagcag
cttactcctcagcagctagctgccatcacccagcaggccggagggcagggaggctccaag
atcgtcatcctgaagggacctggggggcatgcacaggtgctgcagactgttcctgggaca
ggctcccaagcggggaaggtcacctttgccagggtactgtctggaacccaacttaggcct
ggcatgcagatactgtctggaggaacggtcctgaaccaagcgtctcctgggcagggacag
gtgaaggtgggaactgggatacagaggctagttcagtcgcccaacggacccctgaagcag
gtgcagttgatctccatgccccagggccagggccagacgcaaactgtccagatgcaaata
ccgcaggcccagcttgcccaagcgcagcaaatccagctacagccccagacacaggtgcag
ctgcagtctaccatgcaaacgcaggttaccaccactgctacaggcaccacttcagtccga
ccacaaggggttaccctcactacagtaccacagcagggtgaagctaagaggatcaccctg
gtgctgcaacagccccatggtggcacgacccaggggggtgctgtgacggtgggtgggtct
ggtcagctgcagcagggccagcagcagaggctggtgttgggtaacctcccagggaagctg
gtcctccaggggggtcagctggctgctctcacccaggccagggcagggcagacgggggcg
cagcctaaagtacttaccatccagctgcaagtgcagcagcaacccaaccaacagggggga
cccaagtttcagctggtgtctggagggcaaggtagcagcccacaggtggttcagatctcc
caggggcaaggtggacagagactggccatgcccctcaaactgctgctgcaaccacagatg
agctccacctccacagcaggcggtaccgtctccgtagtgaaagtcatcaacacctcggct
gccggctctgccccttccaccaccaccaccatggcatcaacaggtatacggctagccaag
gcccaggagcctgtacggcgtgtggagaccctgggcaagcaggagaaggccaaccgcatt
gtggccgaggccatcgccagagcaaaggcccggggagagaggaacattccacgagtcctc
aaccaggacgaactgcctgctggacagaaggctgctgacaaaggggctgctgcgatgacc
actggcacacctggagccaagaagaaggggggaggaggcgggagtaagaagaaaagccca
ccaggggcaggggggaagggcatggcttgtgctgagaagaaaggcaaggccaaggcagca
ggtggagctgctgtagggacacctgtaggggtggctggaaccagcggcagcaaaagcaaa
agcaaggcaaagatcaatacgatcactctagtggggggtaagaagaggaagaggaatgcc
tcctcagaccactctgatggggagttgagcccttcctctccctctaaggccctggaggag
gacatgttagcgaagaggcgctctaaccgtcaggtgaagaggaagaagtacacggaggac
ttggacatcaaaatcactgacgatgaggatgagccggaggaggacgtggacgtaaccacg
actgcggcggtggcgtccattaccggaggggcagcggggcagctgatgggagagcagctc
aaacaggagctgcagttggacggggacggcctttccagcatgcagttctttgtggaaaac
cccaacgaggaagatgcagcaattgtagacaaagtcttgtccatgaggctaactaaaaag
gaggtgtctccaggacattatataaatgctgaggaattctttgtcaaatataagaactac
tcctacatgcactgtgagtgggccactctggagcagctggagagagacaagaggatccat
cagaagctgaagagattcaagatcaaacacgcacaaatgagactcctcttacaggaggag
gaggaggccttcaacccagactatgtggaggtggaccgtatcctggatgaatccaacagt
gtggacaaggacaatggagagccggtggtgtattacttggtgaagtggtgctctctgccc
tatgaagacgccacctgggagctgagggaggacgtggatgaggacaaggtggaggagttt
aggaagatccaggaccgccaacctcagctcaaaagaacgccccgaccccaagcggctgcg
tggaagaagctggaggaattcacagagtacaagagtgggaacgtacttcgagaataccag
ctagagggagtcaactggctgctcttcaactggtacaacaggcagaactgtatcctggcc
gatgagatgggtctagggaagaccatccagtccatctctctgctgtctgaggtgtttggt
gccggggtccagggccccttcctggtcatcgcccccctctccaccatcaccaactgggag
agggagttcgccacctggaccgacatgaatgccatcgtctaccacggcagcctggccagc
aggcagatgatccagcagtacgagatgtactgcaaggacgacaaggaccatctgatccca
ggggcatataaatttgatgccctgatcacgacgtttgagatgattctgtccgactgccct
gagctgagggagatctcctggcgctgtgtgatcattgacgaagcccaccgcctcaagaac
cgcaactgcaagctgctggacagcctcaagatgctggacctggagcataaggtgcttctg
acaggcactcccctccagaacacagtggaggagctcttcagtctgctgcactttcttgag
ccagctcagttctcctcagagtccgagttcttacgtgactttggagacctcaaaacagag
gagcaggtccagaagctccaagctattctgaagccaatgatgctgcgcagactcaaagag
gatgtggagaagaacttggcgccaaaacaggagaccatcattgaggtggagctgacagat
gtgcagaagaaatactaccgggccatcctagagaggaactttagtttcctcagcatgggg
gcaaccagcaacagcaacgtccccaatctgctcaacaccatgatggagctacgcaagtgc
tgcaaccacccctacctcatcacaggggcggaggagtctattgtggcagagctgagggag
gtgtacgaccccatggtcccagacttccacctgcaggccctggtgagatccgcaggcaag
ctggtcctgctggacaaactgctgcctcgcctgaaggccgggggacacaaggtgctcatc
ttctcccagatggtgcgctgcctggacatcctggaggactacctcatcaacaagagatac
ctgtacgagcgcatcgatggcagagtgagagggaacctgcgtcaggcagccattgatcgc
ttcagcaaaccagactcggaccgtttcgtcttcctgttgtgtacccgggctggaggcctg
ggcatcaacctgactgctgctgacacctgcgtcatctttgactccgactggaaccctcag
aatgatctgcaggctcaggcgcggtgtcaccgtatcggccagtccaaggccgtgaaggtg
taccgtctgatcaccaggaactcctatgagagggagatgttggacaaggctagcctcaaa
ctgggtctggaccgggctgtactgcagagcatgagtggcaacaaggagagcaacgtcaac
ggacaaatccagcagttctctaagaaggagatcgaggacctcctgaggaagggggcgtac
gctgccatcatggacgaggaggacgagggctccaagttctgcgaggaggacattgaccag
atcctccagaggagagccaccaccatcaccatcgagagcgagggcaagggatccaccttc
tccaaggccagcttcgtggccaccgaaaacaggaccgacatcgccctggacgaccccgag
ttctggcagaagtgggccaagagggcagacatagactttgattccatgaataggaagaac
actctggtgattgacacacccagagtaaggaagcagacccgtcagttcgctaccctgagg
ggcgagggcggggagatctctgaccccgacagcgacgacgagtacccacccgccaattcc
cggcagtcccggtcctcaaggcgctccgagcgccacgccggaaatggctacggccgcacc
gactgcttccgtgtggagaaacaccttcttgtttacgggtggggacgctggcgggacatc
ctgtctcatgcacgctgtaagcggcggctcggggagcgtgacgtggagaccatctgcagg
gtcatccttgtcttctgcctgctgcattaccgtggcgacgagaacatcaagagtttcatc
tgggagctcatcacccccccagagaacggccgggaaccacacacactcctcaaccactct
ggtctgtccatccctgttcctcggggcaggaaggggaagagggtgaaggcccagagctcc
tttgacgttcagaaggtggagtggatccgcaagtacaaccccgactccctgcttctggac
gacagctaccgcaaacatctcaagcaccagtgcaacaaggtgttgctgagagtgcgtatg
ctgtactacctgagacaggaagtcattggagagcatgccgattctgtgctgagaggagcc
gatgccagggatattgacatctggatgcctgagatggagcagcaggaggtgccatcaggc
tggtgggatacagaggcagaccgctccctcctcgtcggtgtcttcaaacacgggtatgag
atgtacaccaccatgcgtgccgacgactgtctctgtttcctggagagagctggtcgccct
gacgaccaggccattgatgcggagcagcactctgcagacgcagagctgggagacggagga
gacgatgacaagtattctgaagacccagagttcaagcctgcgtcaaggcacaccaaagac
ctgtatgaggaggctgactccatgaacatgagtgacgatatctgtgtcgatgacaagccg
gggcctgttaaaaccaagggaccgccttctggcctgtcaggagcctgtgagtggccgacc
agctcgtcacttaccgcgcggctccggcgtctgatcactgcataccagcgaagctacaag
agagagcagctgaaggtggaggcagcagagaagggcgaccgcaagcgcaggaggtgtgag
caggccagtaagctgaaggagattgcacgccaggaacgccaacagaggtaccaactacta
ccctcagctattaactcttcaagcatatgtgtcctgaatctgaggtggacccgtagagag
gagtgtgatttctaccgtgtggtatccacgttcggtgtcgagcggataaaggagccaaac
gcccaagagggggaggatgctaaactggaatgggcccgcttccggaccttcgcccgtctg
gacaagaagacggacgagagtctgagtcgctacttccgctgcttcatggccatgtgccgg
agggtgtgcaacctgcggcccgcccgcggagaagacccgtcagagttggggcagtctatg
gcccccatcaccgaggagcgggcctctcgcaccctgtaccgcatcagtctgctgcgccgt
cttcgtgagcgtgtcctgccccacccctccatggaggagagcctgctgctggccccactc
agctctgagcttcccgtctggtggagcactccggcccacgaccgggaactcatgctgggc
gccgccctccacggcgtcagccgcaccgagctttcagtcttctccgacccgcagttctcc
ttcagccaagcccgccacgactacctcgagatccagcagaaccagcccgcccctgccact
cccctccgccaaccacaggcagaggagggctccgccgtcaaggaggaggagggactgaac
gaggagtccgtcctccttggagcttctgaggctctcggccactcagatacccagaccaca
cccctctctcgccctgatgggacgggacaagcccggactggcttgggctggaagaagagc
aaggggaggggcccgagaagcggaggaaggaaaggcggaagaagtggaggagaaggcggg
acgtctgatttggattcagaatctgattcaggctcgtctacctcctcccggcgatcagaa
agctctgacgacagtggggacagcgatgcagagagggagagagctgctctaaagatggag
gaagatggagagaacagcttgctctcaatgactccatctcaagatggcgcgccaccggag
tccctcactgaccccttcagggttgactggcccaaggaccgtgtgttgataaaccggctg
gacagcctctgtacactggtgctgtctgggcagtggccaacagggcgacgctacgcctct
gacgcccagctcaacccaggctctgacgacctaggggcaggggatgagctcagctttgca
cggctcatgcggaaaggcaacagcacccccggtggagaaggtgcagatggagaggaatcg
gagttcacggtcaaactcctcaaggaggaggggctgaagctgaccttctctaagcatgcc
ttgatgtccaacgggtcagggggagaggggagcgggcgcaggaagcgtagggaccaagaa
ttgtcagatccagacggagtggtcccggtggtcgatgccatgacgggcacagtgctgagt
ggggagcgggcccctcgacgcagggacttgcccaactggctgaaggagaacccagagtat
gaggtggagggagacatgctggagctccttgtgaacaggagcaagaggaagaagaagagg
acggagaaggcagcagcgctgtcgggcagtgagaagattaacataattgatatgaggtca
ggaaagaaggttggggctgcacatggacctatgctgcaggatctgagggagtttcttgag
gagaatcctgactgcgcagttgcaccagaatgggctgagactgtccggtgctctggcttt
ctgccagacagcctcttccaccggctactctctgcacactctgtcattcccaagagagac
cgtcaccaccgccaccaccacgctccccagcctgacccgatggaggacccactcctgggc
ggaggtgaagaagagaccctggtctcagatggggcctacatgatggaggacgaagacttg
gaggattcttctttcctgacacaagcctttgatgttaagatggaaggcggcgacagcttg
tcacgaggcggatacgagagttctgacagggaggcccttttggacgacgtcatcatggcg
cagaaggacacggactcttcctccagctcagaggattga
DBGET
integrated database retrieval system
