Salmo salar (Atlantic salmon): 106600387
Help
Entry
106600387 CDS
T04363
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106600387 (ncstn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
106600387
NCBI-ProteinID:
XP_014047168
UniProt:
A0A1S3R483
LinkDB
All DBs
Position
ssa03:complement(34806789..34820232)
Genome browser
AA seq
708 aa
AA seq
DB search
MTFSVVSETRKMDLESSKWVIILLVCGLYKNVSCNSVEQKIYVELNNTVPCVRLLNATHQ
IGCQSSISGDTGVIHVLESESDLEWPLSKGPNPPYMVLLESSLFTRSIMMKMKNESNRVA
GVAVVVPNTSPPEFSPHTTCPNENTGVYSDNYGPNLAHCNTTVWNPLGNGLSYEEFDFPV
FSLKEDNETEFIKQCYLDHNRAVNGSAPQYPLCAMQLFSHMHAVTNTPTCMRRNDINFSI
NPEMVCDPLGDYNVWGSIRPYNDTVFGHKENESVVIAAARLDSRAFFWEVSTGAEGSISG
FVTLLAAAQALREVTHEAPPTRNILFAFFQGETFDYIGSSRMVYDMENGKFVIDLDNVHS
ILEIGQVAVHSGTNLFLHSDPVSRRNNTVNDEVKNLVNNLQSSTAGLSFLLVEPNVSQPL
PPSSLQRFLRAQPIPGIVLADHESAFNNRYYESFYDNAANLNLTYPSDLSPEEQLEFVTD
TAQSLTDVATVVARALYKQAGGNESLVNTIKADPKIVTQMLYGFLVSSNNSWFQAVMAPE
LKNILKPSPPEYYVGVAMSSTPTRLVQYLLANLTGAVTNLTQSQCQKPDELPNESRQMYS
YLWVQGIVPPNSTQRDSFCVRASVRLTKAVSPAFELGEYASKDYSTWTESRWKFIKARIF
LVASRDLEMLTLGAGVAVLFTSLLVTYFISTKADVLFSSMREPASAAY
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgactttcagcgttgtttctgaaaccaggaagatggatttggaatcgtcgaaatgggtt
ataatattgttagtttgtgggctttacaaaaatgtgagctgtaactctgttgagcagaag
atttatgtggagctgaataacactgtaccatgcgttcgactgctcaatgctacacatcag
attggctgccagtcctcgatatcaggtgatacaggtgtgatccatgtcttggagtctgag
tcagatctggaatggcctttgagcaaaggacccaatcctccttatatggttctgttggaa
tcatccctcttcaccaggtccatcatgatgaagatgaagaatgaatccaacagggtagct
ggggttgcagtggtggtcccaaatactagcccaccagagttctcgccacacacgacatgt
cccaatgagaacacaggtgtatactccgacaactatggtcctaatttggcacactgtaac
actactgtatggaaccctctggggaacggtctatcctatgaggaatttgacttccctgtc
ttctccctgaaagaagacaacgaaacagagttcatcaaacagtgctacttggaccataat
cgtgcagtgaacggcagtgccccgcagtaccctttgtgtgccatgcagctcttctcccac
atgcacgcagtcaccaatactccaacctgcatgagacgcaacgacatcaacttcagcatc
aacccagagatggtgtgtgaccctctgggtgattataatgtttggggttccatccggccc
tataacgacaccgtcttcggccacaaggagaacgagagcgttgtaatagcagcagccagg
ctggacagcagggcatttttctgggaggtttcaactggagcagagggaagtatctcaggg
tttgtcactctgcttgctgctgcccaggcactgcgtgaagtcactcatgaggcccctccc
acacggaatatcctctttgccttcttccaaggggaaacctttgactacattggcagctct
cggatggtttacgacatggagaatggcaagtttgtgatagacctggacaatgttcactca
atactagagattggtcaggtggccgtgcatagtggcaccaacctctttctccactcagac
cctgtgtccaggaggaacaacactgtcaatgatgaggttaagaatcttgtgaacaattta
cagtcctccacggctgggctcagcttcttattggttgagcctaatgtctctcagccgctc
ccgccctcctccctccagcgtttcctgcgagctcagccaatcccagggattgtgcttgca
gaccacgaatccgctttcaacaacagatactatgagagtttttacgacaacgctgctaac
ctgaacctgacttatccatctgacttgagtccagaggaacagctggagtttgtgactgat
acggcacagtcccttactgatgtggctacggtggttgcacgtgctctctacaagcaggcc
gggggaaacgagtccctagtcaacaccatcaaagcagaccccaaaatagttacccagatg
ctgtatgggtttctggttagttccaacaacagttggtttcaggcagtgatggccccagaa
ctaaagaacattctcaagcccagcccaccagagtactatgttggtgttgccatgtcttcc
actccaactcgtctggtccagtacctcctggccaatttaactggagcagtcaccaacctc
acccagagtcagtgccagaagccagatgagctgccgaacgagagcagacagatgtactcc
tatctctgggttcagggcattgtcccacccaacagcacccagagggattctttctgcgtg
cgtgcatcggtacgcctgaccaaagcagtgtctcctgccttcgagctgggagagtatgct
tccaaagactattccacgtggacagaatcacggtggaagttcatcaaagctcgaattttc
ctagtagcgagccgggacttggagatgctgaccttaggtgcgggagtggctgtgttgttc
acatccctactggtgacatacttcatcagcaccaaggcagacgtcctcttcagctccatg
agggaacccgctagcgccgcctattga
DBGET
integrated database retrieval system