Salmo salar (Atlantic salmon): 106600519
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Entry
106600519 CDS
T04363
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1-like
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04080
Neuroactive ligand-receptor interaction
sasa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106600519
04082 Neuroactive ligand signaling
106600519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106600519
Ion channels [BR:
sasa04040
]
Ligand-gated channels
GABA-A
106600519
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
106600519
NCBI-ProteinID:
XP_014047420
UniProt:
A0A1S3R4X7
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Position
ssa01:complement(29012327..29027535)
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AA seq
468 aa
AA seq
DB search
MNSGISAICAMLLLQHVKGKAMNAWLLLALLGVCVASFGPSTKEDEDYEDVPINKTWVLS
PKVYESDVTLILNRLLQGYDNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFA
QTWYDSRLKFNSSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWNNGRV
MYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEILYRWQKRSVEVADQRYWRLY
QFAFVGLRNTSDVAHTQSGEYVILTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINK
DAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHY
FTSNRQSKKDTDKKPQKSSSLVNIRPGTSLLQMNNIAPYQDEDDYAYECLDGKDCTSFFC
CFDDCRSGAWRENRMHVRVSKIDSYSRIFFPTAFGLFNLVYWIGYLYL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgggatttccgcaatatgtgccatgcttctgctgcaacatgtcaaaggcaaa
gcgatgaatgcgtggctgttgctagctcttctcggagtctgtgtggcgtcatttgggccc
agtacaaaggaggatgaggactatgaagacgtccccataaataagacctgggttttatcg
cccaaggtctatgagagcgatgtcaccttgatcttaaatagattgctgcagggctatgac
aacaaactccgacctgacattggagtaaggccaacagtgattgagacagcggtgtatgtc
aacagcatcggaccagtcgatcctattaacatggagtacaccatagacatcttctttgcc
cagacgtggtatgacagtcgccttaagttcaacagctccatgaaagtcctgatgctcaac
agtaacatggtgggaaagatctggattcctgacaccttcttccggaattctagaaagtct
gacgcccactggatcaccactccgaaccgtctgctgcgactgtggaacaacgggagagtg
atgtacacgttgaggttgactattaatgcggaatgctaccttaagctgcataactttcct
atggacgagcactcgtgtccgctggagttttcgagctatggctatcctaaaaatgagatt
ctgtaccgttggcaaaagcgttctgtggaagtggccgaccaaaggtactggagactctac
cagtttgcgttcgtcggtttacgaaacacatcagatgtggcgcatacacaatcaggtgaa
tatgtcatcttgacaatcttttttgacctgagtcggcgaatgggctacttcactattcag
acgtacatcccctgcagcatgattgtggtgctgtcatgggtctctttctggatcaataaa
gatgctgtccctgccaggacctccttaggaatcaccacggtgcttaccatgacaacgctg
agcaccatctccaggaagtcgcttcccaaggtatcctatgtgacggccatggacctgttt
gtgtctgtctgcttcatcttcacgtttgctgctctgatggaatatgggactctacactac
ttcaccagcaataggcagagcaagaaggatacggacaaaaaaccacagaaatccagcagc
ttggtgaacattaggccagggacgtcactgctccagatgaataacatcgccccctaccaa
gacgaggatgattacgcctacgagtgtctggatgggaaggactgcaccagcttcttctgc
tgcttcgacgactgtcgctccggagcatggcgcgaaaaccggatgcatgtccgagtttca
aagatcgattcctactcacgaatattcttccccaccgccttcggccttttcaacctggtc
tactggatcgggtatctgtacttataa
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