Salmo salar (Atlantic salmon): 106600909
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Entry
106600909 CDS
T04363
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00310
Lysine degradation
sasa00514
Other types of O-glycan biosynthesis
sasa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106600909
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
106600909
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
106600909
Enzymes [BR:
sasa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
106600909
Glycosyltransferases [BR:
sasa01003
]
O-Glycan biosynthesis
O-linked Gal type
106600909
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
106600909
NCBI-ProteinID:
XP_014048151
UniProt:
A0A1S3R7P9
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Position
ssa03:complement(53722789..53750589)
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AA seq
609 aa
AA seq
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MHGYNVLLSTALTILFSGTAQGYFPEERWSPESPLLAPRVLIALVCRNSEHSLPYFLGNI
ERLNYPKDRVAIWVATDHNVDNTTAILRDWLVKVQKLYHYVEWRPQEEPTEYQDADSPKQ
WTNLRYAHVMKLRQAALDSARNMWADYFMVADCDNLLTNPNVLWKLIKEKKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAFHP
PHPDYSWAFDDIIVFAFSARMADVQMFLCNRETYGYFPVPLRAHNSLTDEAESFLHSLLE
VNVRNPHVLPSEYIPAPIKIQDKLGFDEVFMINLKKRTDRRDRMLRTLYEQEIACKVIQA
VDGKAMNISEINALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIAERGLKSSLVI
EDDLRFEVFFKRRLMNLMSEVESQGLDWDLIYIGRKRMQVDRPEKSVPNIHNLVEADYSY
WTLGYMISLQGAQKLLRAEPLKRILPVDEFLPVMFNKHPVSDYMEQFEERNLKAFSAEPL
LVFPTHYTGDAGYISDTETSVVWDNEKVRTDWDRARSGKTQEQAEISSEAQNSDVLQSPL
DSTATRDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggtacaacgtacttctgtccaccgccctgacgatactgttctccggaacagct
caaggatacttccccgaagagcgctggagccccgaatctccacttcttgccccgcgggtc
ctcattgccctcgtctgccgcaactctgaacattctctgccttatttccttggaaatatc
gaacgtctgaattatcccaaggaccgcgtggcaatttgggtagcgacggaccacaatgtg
gacaacactacagccatcctgcgtgactggctcgtcaaggtccaaaaactctaccactat
gtggagtggaggccgcaggaggagcccacagagtaccaggatgcagacagcccgaagcag
tggaccaacctccgctatgcacacgtgatgaagttacggcaggcagcactggactccgca
agaaacatgtgggcagactacttcatggtggcggactgtgataaccttttgaccaatcct
aatgtactgtggaagctcatcaaggagaagaagaccatcgtagctcccatgttagagtcc
cgtgcagcctactccaacttctggtgtggcatgacctcccagggttactataagcgcacc
ccggcctacatccctatgagaaagcaggtgcgtaaaggatgcttcgcggttcccatggtg
cactccaccttcctgattgacttgaggaaggaggcgtcacgccagctggccttccacccc
cctcacccagactacagctgggccttcgatgacatcattgtcttcgccttctccgctcgc
atggcagatgtgcagatgttcctatgtaacagagagacttatgggtatttccccgtgcca
ctgcgagcccacaactccctgacagacgaagcggagagcttcttacattccttgttggag
gtcaatgtgcggaaccctcatgtgctgccctctgagtacatcccggcccccataaagata
caagataaactgggctttgatgaggtgttcatgatcaacctaaagaaacggacagaccgg
cgggatcgcatgctgaggactctgtacgagcaagagattgcctgcaaggtcattcaagcg
gtagacggcaaagcgatgaacatcagtgagatcaatgccctggggatccacatgctacca
ggctacagtgatccgtatcacggcaggcccctcactaagggagagctgggctgcttcctc
tcacactacaacatctggaaagagatcgcagagcggggtctaaagagttccctggtgatc
gaggacgatctgcgtttcgaggtcttcttcaagcgacgcctgatgaacctgatgagtgaa
gtggagagccagggtctagactgggacctgatttatatcggcaggaagaggatgcaggtg
gaccgccctgagaagtccgtgcccaatatacacaacctggtggaggccgactactcctat
tggacgctgggatatatgatatcattacaaggagcccagaagctgctgagggcagagccg
ttgaagaggatattacccgtagatgagttcctccctgtcatgttcaataagcaccctgtc
tcggactacatggagcagtttgaggagcgaaacctgaaggccttctcagccgagcctctg
ctagtgttccccactcactacacaggagacgcgggctacatcagcgacacagagacctcc
gtggtgtgggacaacgagaaggtgcgtacggactgggaccgagcccgctcggggaagaca
caggagcaggcggagatcagcagcgaggcccagaactctgacgtactccagtcacctctg
gacagcacagccacacgggacgaactatga
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