KEGG   Salmo salar (Atlantic salmon): 106600998
Entry
106600998         CDS       T04363                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03266  Virion - Herpesvirus
sasa04081  Hormone signaling
sasa04145  Phagocytosis
sasa04148  Efferocytosis
sasa04510  Focal adhesion
sasa04512  ECM-receptor interaction
sasa04517  IgSF CAM signaling
sasa04518  Integrin signaling
sasa04810  Regulation of actin cytoskeleton
sasa04820  Cytoskeleton in muscle cells
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    106600998
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    106600998
   04512 ECM-receptor interaction
    106600998
   04517 IgSF CAM signaling
    106600998
   04518 Integrin signaling
    106600998
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    106600998
   04148 Efferocytosis
    106600998
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106600998
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106600998
   04810 Regulation of actin cytoskeleton
    106600998
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106600998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106600998
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106600998
   04515 Cell adhesion molecules [BR:sasa04515]
    106600998
   04090 CD molecules [BR:sasa04090]
    106600998
Membrane trafficking [BR:sasa04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    106600998
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106600998
Cell adhesion molecules [BR:sasa04515]
 Integrins
  Integrin beta subunits
   106600998
CD molecules [BR:sasa04090]
 Proteins
  106600998
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_TEN
Other DBs
NCBI-GeneID: 106600998
NCBI-ProteinID: XP_014048308
UniProt: A0A1S3R7G7
LinkDB
Position
ssa03:complement(59584821..59601256)
AA seq 787 aa
MGTFFDRLWIFSGLLLASSEVLGSNICTSRGVSTCRQCLAVHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTEEGLEFPFSTLSVQKDTPLSDKASGAADDVTQIRPQKLRLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMRDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAVSNPCYGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAVIQAVVCKDKIGWRADASHLLVFTTDATTHIALDGRLAGLVQPNDGQCHI
NRDNNYDKSSSLDYPSLALITEKMSENNINLIFAVTNNVVPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKAEDPICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCSTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCARIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVQHFQYYEDASGKSILYVMEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVTVHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgggaactttttttgaccgactatggatattttcgggtttattattagcttcttctgaa
gttcttggctcaaacatctgcacatctcgaggggtgagcacctgcagacagtgtttggct
gtccaccctagctgtgcttggtgctttaaggaagagtttggtcaaggggggtccagtgta
tcccgttgtgatctgaagcagaacctgttggatggggggtgtacggaggaggggctagag
ttccccttcagtaccctcagtgtgcagaaagacacgcccctcagtgacaaggcatcggga
gcggctgacgacgtcacccagatcagaccccagaaactccgcctcactctgagaccagat
gatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccagttgacctgtac
tatctgatggacctctcctactccatgagggacgacttggcccgcctgcgctccctgggc
aaccagctggctgcagccatgggccgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtccccatatatgtacacctaccctgaggaagccgtcagtaac
ccttgctatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtct
ctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtctcgtaac
agagactctccagagggaggcttcgacgcggtcatacaggcggtggtgtgcaaggacaag
ataggctggcgtgcggatgcctcccacctgttggtgttcactaccgatgctacgacacac
atagccctggacggccggctggctggcctagtgcagcccaatgatggacagtgtcacatc
aacagagacaacaactatgacaagtcgtcaagcctggactacccctctctggctctgatc
acagagaagatgtcggagaacaacatcaacctcattttcgctgtgaccaacaatgtggtg
cccctctaccagaactacagccagctcattcccggcaccacagttggaacgctgtcggat
gactctgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gagctggagttgctgggtgttccagaggagctggctctgtccttcaacgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccggacttaagatcggagacacggtg
tcgttcagtgtggaggccaggttacgcggctgccctaaggagaagaaccgtaccttcacc
attaaacctgtgggcttcaaagacgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagtcctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgaatgtgctgac
ggggactacaggccctcagaccagggcaactgcagccccaaagctgaggaccccatctgc
agtgggaggggcaactgtgtgtgtggccagtgctcctgccacactagtggctttggaaag
gtgtggggcaagtactgcgagtgtgacgacttcaactgccttcgcttcaaaggagagatc
tgctcaggccatggtaaatgtgactgtggcttctgcaagtgtggctctgactggatgggg
gagaactgtaactgttccacccggacagacacctgcatgtccagtatgggcctgctgtgc
agcggccggggccagtgtgtgtgtggggcctgtgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccaacctgccctgatgcctgcagcatcaagaaggaatgtgtt
gaatgtaagcacttcaagagaggccgtctctttgaggagaaaagctgtgcccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtacagcacttccagtactatgaggatgccagtgga
aagtccatcctatatgtcatggagcctgactgccctaaagggcctgatatcctggtggtt
ctcatggcggtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcaccgttcatgaccgccgagagttcgccaagtttgaggaggagagggctaag
gccaaatgggatacggctaacaaccccttgtacaaaggagccaccaccaccttcaccaac
gtgacctaccgtgggaattcttga

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