Salmo salar (Atlantic salmon): 106601086
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Entry
106601086 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1-like
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
sasa04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106601086
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
106601086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106601086
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106601086
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106601086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
106601086
NCBI-ProteinID:
XP_014048470
UniProt:
A0A1S3R7X8
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Position
ssa03:63516770..63523860
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AA seq
551 aa
AA seq
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MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDAPVEEGGKPKVLYGV
EFTFDADARVAITLYCQAFEEFTNGMAMYNPKGPALVSETVHYKRGVSQHFSLPSFKIDF
TDWKEEDLNFDLDRGVFPVVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSEDENSDNSNECVVCLSDLRDTIILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGPLSPVSFSPVLAQTMDHDEHSSSDSVPP
GFEPISLLEALNGLHSVSPSIPPAPLYDDINFSGSLVGEGRPLGSPEHSGDGGLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTEATAAEDVPESISPDDEDR
LHSGGEREILHDYSSEHSSLTKTESDPPGDLSLRGSSESTESLKSQSTNCSSQPLLCPPS
SLHMEDEQLDP
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgattcttagccggagaatcgctggcgttgaggatattgatatccaggcgaat
tcagcatacagatttccaccgaaatcggggaattactttgccagccattttttcatggga
ggggagaaatttgacactccccatccagagggttacctatttggagaaaacatggatctg
aacttccttggaaataggcctgtacaatttccgtacgtgacccctgcaccccatgagcct
gtgaagaccctgagaagtctggtcaatatcagaaaggactccctgcgcttggtcaggtac
aaagatgacactgacgctccagtagaggaaggaggcaagccaaaggttctgtatggtgtg
gagttcacatttgacgctgatgctcgtgtggctatcaccctgtattgccaagcttttgag
gaattcaccaatgggatggcaatgtacaacccaaagggcccagccctggtttctgagact
gtacactataagaggggtgtgagccaacatttctccctgccttctttcaaaatcgatttc
accgactggaaggaggaggatctgaactttgacctggacaggggtgttttccccgtggtg
atccaagctgtggtggatgaaggggatgattgcttgggacatgcacatgtgctgctggca
gcctttgagagacatgtggatggcagtttctccgtcaagcctctgaagcagaagcaaatt
gtggatcgtgtcagctacctgctgcaggagatctatggaattgaaaacaaaaacaaccaa
gagaccaagccgtcggaggatgagaacagtgacaacagcaatgagtgtgttgtttgtctg
tcagacctccgagacaccatcatcctgccctgcagacacctgtgtctctgcaactcctgt
gctgacaccctgcgttaccaggccaacaactgccctatctgcagactgcccttccgagcc
ttgctgcagatcagagctgtgagaaagaagcctgggccgctgtcccctgtgtctttcagc
cctgtattggctcagaccatggaccatgatgagcactcgagctcagactcggttccccca
ggctttgagcccatctctctgctggaggccctgaacggcctgcactctgtgtccccctcc
attccccccgcacccctctacgatgatattaacttctctgggagcctggtaggggagggt
cggccgctgggctccccagaacactccggggacgggggcctgcagaagggcaaagtcagc
aagtcacctgacagcaccctgaggtcgccctcatcacccatccaggaggaggatgaggag
aagctgtctgagatgtcggacgcccagcctcacaccctgctctccagcagccctgcaccc
accgaggccactgcagccgaggatgtaccagagtccatctccccagatgatgaggacagg
ctgcactctggaggagagagagagatccttcacgactacagcagtgaacacagcagcctg
accaaaacagagagtgacccgccaggggacctgtctctgcgggggtcatcagagtcaaca
gagagcctaaagagtcagagtaccaactgctccagccagcccctcctctgtccccccagc
agccttcacatggaggatgagcaacttgacccctaa
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