KEGG   Salmo salar (Atlantic salmon): 106601115
Entry
106601115         CDS       T04363                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03013  Nucleocytoplasmic transport
sasa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106601115
   03015 mRNA surveillance pathway
    106601115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106601115
   03041 Spliceosome [BR:sasa03041]
    106601115
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106601115
Spliceosome [BR:sasa03041]
 Complex C
  Other components
   EJC/TREX
    106601115
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA DUF5097 Aconitase_C
Other DBs
NCBI-GeneID: 106601115
NCBI-ProteinID: XP_014048527
UniProt: A0A1S3R9I9
LinkDB
Position
ssa01:32707871..32713540
AA seq 694 aa
MAVAVGSLQAQLEKAKESLKNVDDNIRKLTGRDPNELRPGQVRRPTIPGVGGGRGRGINL
LRRGLSDISGGPGGPPVKQRDIEGALLRLAGDQRGRRDSRHDSDAEDDDDVKKPVLQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVATDRQKKRIEIEQK
LEVQAEQERKKVEGERRELFEERRAKQTELRLLEQKVELAQLQEEWNVHNTKIVKYIRTK
TKPPIFFLPGRMCSATQKLLDESQKKMNIMFEERREAFAEHLNKMEARPRRQSQRDTALG
KDLKKEDREEGKPTGQVVKVTGNRFDVEMEEEDEATIEEEERDEGIKRKEDRKKKPVEKV
GEQESKKGGTKADEMEEAEEDSQDTRIVEFRDVGEQMEATAVVREAEGQARDGDQKMEDS
PVEVGNEKGVEEQQPVKVEKEPLHGQDLTAVSDNQEKSIEMQPTEDEEPRTEVATPLLSE
CNPSVEVSDVTSMAPEVQIPLLEAGTEPEPLTTEQSQEADQVVIKQTTNAQPAQAQDDAA
APKELAPPSKEASRGRKKSKDKKGGGGGRSSSSSSSSSSGSSSSGSSGSSSSGSSSRSSS
SSGSSSSSSSRSRSRGRKDKKRRRRPSERDRERKKAVVERSHKSSKGSGRESKGSKDKIS
KSDRNRTTSEGSRSGKRSSRGDRDRKSDRKEKRR
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggcggtggcagtgggatctttgcaagcccagcttgagaaagcgaaagagagtttgaaa
aatgtagacgataatattcgtaaattaactggtcgggatcctaatgaattgagaccgggc
caagttagacggccgaccatcccaggtgttggaggaggtagggggcgaggaatcaacttg
ttgagacgtggactctccgacatcagcggtggaccaggaggacccccagtgaaacagagg
gatattgaaggggccctcctgaggctggccggtgaccagagagggaggagagattcacgc
catgacagcgacgctgaagatgatgacgatgtcaaaaagccagtgttgcagtcatcagta
gtagctacctccaaggagcgtacacgtcgagacctgatccaggatcagaccatggatgag
aggggaaaacaaaggaatcgacgcatgtttggcctgttgatgggaacattacagaaattc
aagcaggaatctaatgtggcaacggataggcaaaagaaacgcattgagattgaacaaaaa
ttggaagttcaagctgaacaagagcgcaaaaaagtagagggcgaaagacgagagctcttt
gaggagaggcgtgccaagcagacagagctgagactgttggaacagaaagtggagcttgct
cagttgcaagaggagtggaatgtgcacaacacaaaaattgtcaagtacatccgcacaaag
accaagccacccatcttctttctgcctgggaggatgtgctcagccactcagaagctctta
gatgagtctcagaaaaaaatgaatattatgtttgaggagagacgcgaggcatttgctgag
catctgaataagatggaggctcggcctcggcgccagtctcagagggacaccgctcttggt
aaggacctgaagaaagaagatcgagaggagggtaagcccacgggtcaggtagtcaaagtg
acaggtaaccggtttgatgtggagatggaggaggaagatgaggcaacaatagaggaggaa
gagagggatgagggtataaagcgtaaggaggacagaaagaaaaagccagtagagaaagtc
ggggagcaggagtctaagaagggggggactaaagcagatgagatggaggaggctgaggaa
gacagtcaagacactagaatagtggagttcagagatgtgggggagcagatggaggctact
gcagtagtgagggaggctgaagggcaggccagagatggggatcagaagatggaggatagt
ccagtggaggtaggtaatgagaaaggagtagaagagcagcaaccggttaaggtagaaaag
gagccccttcacggtcaagacctcacagctgtgtcagacaaccaggagaagagcattgaa
atgcaaccaaccgaagatgaagagccacgtacagaagtggccacacccctgctctcagag
tgcaaccctagtgtggaagtctctgatgtaacatctatggctcctgaggttcagatcccc
ctactggaggctggaacggagccagagccactcacaaccgagcagagccaagaggctgat
caagttgtcataaagcagaccactaatgcccagcctgcccaggcccaggatgatgctgcg
gctcccaaggagctggcgccgccgagcaaggaagccagcaggggacgtaaaaagtcaaag
gacaagaagggaggtggtggtgggagaagcagcagtagctcatctagcagctcctccggc
tcctcgtccagtgggagctccggctcctcctctagtggctcctccagcaggagcagctcc
tccagtggcagctcctccagctcttctagcaggagccgcagccgagggaggaaggacaag
aagcgtaggaggaggccatccgagagggacagggagaggaagaaggcagtagttgagagg
agccacaagtcatccaagggcagtggtcgtgaatccaaaggttccaaagataagatctcc
aagtctgacaggaacaggaccacctctgaaggcagccggtcagggaagaggtcctctcgc
ggtgacagggatcgcaagtcagataggaaggaaaagaggcgttaa

DBGET integrated database retrieval system