Salmo salar (Atlantic salmon): 106601193
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Entry
106601193 CDS
T04363
Symbol
RD23A
Name
(RefSeq) UV excision repair protein RAD23 homolog A-like
KO
K10839
UV excision repair protein RAD23
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03420
Nucleotide excision repair
sasa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106601193 (RD23A)
09124 Replication and repair
03420 Nucleotide excision repair
106601193 (RD23A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sasa03051
]
106601193 (RD23A)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106601193 (RD23A)
Proteasome [BR:
sasa03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106601193 (RD23A)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
106601193 (RD23A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
UBA_3
Dsc3_N
OTU1_UBXL
Exotox-A_target
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
106601193
NCBI-ProteinID:
XP_014048667
UniProt:
A0A1S3R9Y6
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All DBs
Position
ssa03:complement(64496622..64504768)
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AA seq
351 aa
AA seq
DB search
MQITLKTLQQQTIQIDIDPDQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKSATAASTPSSEAPKAPVQDSGSSAGPAPAAIPIPPEEPTPSV
AEPPAPASSDPSVEVQGGDASSALVTGAEYEIMLAEIMSMGYERERVVAALRASFNNPHR
AVEYLLTGIPSSPVQETNPPAQLPASARTETPTVAEGENPLEFLRSQPQFQSMRQVIQQN
PSLLPALLQQLGRENPQLLQQISQYQELFIQMLNEPAGEVGDVPEVGDLGAAVEEGAPVN
YIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQGFEDE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacgctaaaaacactgcaacagcagaccattcaaattgacatagacccagat
caaacggtgaaggcattgaaggagaagatagaagcagaaagggggaaagataacttccca
gtgtctggacagaagctcatatatgctggcaaaatcctgcaagatgacacacctattaaa
gactacaaaattgacgagaagaatttcgttgtagttatggtatcgaaggcaaagtctgcc
acagctgcttcaacaccttcctcagaggcacccaaggcccctgtccaggactctgggtcg
tctgcgggcccggcccctgcagccatccctatccccccagaggagcccacaccttcagtc
gcagagcccccagctccagccagttccgaccccagtgtggaggtccaggggggagatgcc
tcctctgccttggtgacaggagcggagtatgagatcatgctggcagagatcatgtctatg
ggttatgagagggagagagtggtagctgctctccgggccagcttcaacaacccccatcgg
gccgtggagtacctcctcactggcattcctagcagtccggtccaagagactaatccccca
gcacagcttcctgcatctgcccgcacagagactcctactgtagctgagggagaaaaccct
ctggagttcctgcgttcccagcctcagttccagagcatgaggcaggtgatccagcaaaac
ccctcactgctgccagctctactccaacagcttggccgggagaacccacagcttctacag
caaatcagccagtaccaggagctgttcatccagatgctgaatgagccggcgggggaggta
ggagacgtgcctgaggtgggggacttgggtgctgcagtggaggagggagctccagtcaac
tacattcaggtcacgcctcaggagaaggaagccatcgagaggttaaaagcgttgggtttc
cccgaggcactggtgatccaggcctactttgcctgtgaaaagaacgagaacctagcggcc
aacttcctcctgaaccagggctttgaggatgaatga
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