Salmo salar (Atlantic salmon): 106601208
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Entry
106601208 CDS
T04363
Symbol
grin2b
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04020
Calcium signaling pathway
sasa04080
Neuroactive ligand-receptor interaction
sasa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106601208 (grin2b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106601208 (grin2b)
04082 Neuroactive ligand signaling
106601208 (grin2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106601208 (grin2b)
Ion channels [BR:
sasa04040
]
Ligand-gated channels
Glutamate (ionotropic)
106601208 (grin2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
106601208
NCBI-ProteinID:
XP_014048692
UniProt:
A0A1S3RAD4
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All DBs
Position
ssa03:complement(64870379..64955817)
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AA seq
1721 aa
AA seq
DB search
MTFWLPIHKVLHFHSSIMPVCGCHSPSHPQERRASPTPLPPQEVRRPPRRRAALSSLSLS
LLGLLMCLFHLPPACHSRRDKGGGVAHYIPMAQPPHHQVLPKLVQGLSIAVVLVGNSSEV
ALAGAREKDDFLHMPLAPNVEVLTMNETDPKSIIKSICDLMTEHWLQGVVFGDDTDQEAI
AQILDFISAQTHIPILGVRGGSSMIMAAKDDNSMFFQFGPSIEQQASVMLNIMEEYDWYI
FSIVTTYYPGYLDFVTKIRSTIENSFVGWELEEVLLLDMSVDDGDSKIQNQLKKLQSPVI
LLYCTKEEANTIFEVAHSVGITGYGYTWIVPSLVAGDAEVIPAEFPTGLISVSYDEWDYG
LEARVRDGVAVIAMATSTMMLDRGAHTLMKSECHGATDKKGPIAGNPNEVLRYLMNVTFE
GRNLSFSEDGYQMHPKLVIILLDKMRQWDKVGKWENGSLSMKYHVWPRFEIYSGAESRED
DHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRRQLQTMLAGNKTIDSGIYIKRCCKGF
CIDILKKIAKHVKFTYDLYLVTNGKHGKKINGTWNGMVGEVETKKAHMAVGSLTINKERS
EVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLLVSAIAVFVFEYL
SPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGWTSKIMVSVWAFFAV
IFLASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIKNNYK
EMHGYMIKFHQKNVDEALYGLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFAST
GYGIAIQKESGWKRHVDLAILQLFGDGDMEELEAMWLTGICHHEKNEVMSSQLDVDNMAG
VFYMLGAAMALSLITFIAEHAFYWQLRFCFMGYCTGKPGFVFSISRGIYSCIHGVQIEEK
SSSALDSPSVTMNNTQSNILRLLRTAKNMASLSGVNGSPHSALDFIRRESSVYDISEHRR
SLAGHSDCKPPYMPEDNMFSDYINEVERTFGNLHLKDSNLYQDHYLHHHGGSALGLSGPP
LNRPHSLGSNSSLEGGMFDCDSLGGGVAPIFTTQPRSALTHRNMSKFDLIAGQNPPSGPG
FKSGLSDLYGKFSFKGGASSSGYIPGHDRYCGGGGREDDGNIRSDVSDISTHTVTYGNLE
GNAKKRKQYRDSLKKRPASAKSRRELDEIELGYRRKPYHTGYHHYHGHRSSSPPLLASER
KRGGGGNAGSTSYLFRDKESVRDFYLDQFRPKDGVPQWEHVDLTDGPGGGGGGGGGNCTS
LVSVDDFLKQNKPKKSESKSGGGTSGAGLAGGDWECRNCRASGGGGKQMSMHGSGAGERG
GGYGGGVSCGSSGGGGNSRPSSATCMRCEGCKKTGNLYDISEDNNHLLEQMGGGKGGGMG
AVGLSGGAQPQSQAQRRKSAGFGKPLRRQHSCDTFVDLQKEEAVGVRGVMGDLGGGGGGM
GGVGMGGMLPPPRSVSLKEKERYMEGVSPFAHIFERHGGSEREKERDRDPLFYGGEMAKE
AGSPFGLFRGGDGLHRRSVGERDMRDRERAMMEGGGGGTYSLSKSLYPDRVNQNPFIPTF
GDDQCLLHGAKQYYMKKQQQQQQMPPKNSRSDFRGSVGVTSFLPATATAGVMSTVAPRFP
MELCLGGNLHGSTLGVGPIQRPFNGSNGHVYEKLSSIESDV
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgacattttggctgccaatacacaaggtattacatttccactcctcgattatgcctgtc
tgcggctgccacagcccctcccaccctcaggaaaggcgagcgtcccccacgcccctgccc
ccccaggaggtgagacgtcctccccggcgccgtgcggccctctcctccctctccctgtcc
ctcctgggcctcctgatgtgcctgtttcacctgccccctgcctgtcactctcgcagagac
aagggcgggggcgtggcccactacatccccatggcccagcccccccaccaccaggtgctg
cccaagctggtgcagggcctcagcatcgccgtggtgctggtgggcaactctagcgaggta
gcgttggcgggcgcccgggagaaggacgacttcctgcacatgccgctggcgcccaatgtg
gaagtactcaccatgaacgagacggaccccaagagcatcatcaagagcatctgtgacctg
atgacagagcactggttgcagggcgtggtgttcggggacgatacggatcaggaggccata
gcccagatcctggacttcatctctgcacagacacacatccccatcctgggggtccgcggg
ggctcctccatgatcatggctgccaaggatgacaactctatgttcttccagttcggcccg
tccatcgagcagcaggcctcggtcatgctcaacatcatggaggagtacgactggtacatc
ttctccatcgtcaccacatactaccccggatacctggactttgtcaccaagatccggagc
accatagagaacagctttgtgggctgggagctggaggaggttctgctgctggacatgtca
gtggacgatggagactcgaagatccagaaccagctgaagaagctgcagagccccgtcatc
ctgctgtactgcactaaggaggaggccaacaccatcttcgaagtggcccactccgtaggg
atcacgggctacggctacacctggatcgtcccctcgctggtagctggggacgctgaagtg
atccctgccgagttccctacaggtttaatctctgtgtcgtatgacgagtgggactacggc
ctggaggctcgcgtgcgcgatggggtggctgtcatcgccatggcaacctccaccatgatg
ctcgacaggggggcacacaccctgatgaagtctgagtgccacggggccacggacaagaag
gggcccattgctgggaaccccaatgaggtgctcaggtacctgatgaacgtgacgtttgag
ggccggaacctgtccttcagtgaggacggctaccagatgcatcccaaactggtcatcatc
ctactggacaagatgaggcagtgggacaaggtggggaagtgggagaatggctccctgtcc
atgaagtaccacgtctggcctcgctttgagatctactcaggggcagagagccgggaggac
gaccacctttccatcgtcacgctggaggaggctccgttcgtcatcgtggaggacgtggac
cccctcagtggcacgtgtatgaggaacactgtgccctgcaggagacagctccaaacaatg
ctcgcgggaaataaaaccatagattctgggatctatatcaagcgctgctgtaagggtttc
tgcatcgacatcctgaagaagatcgccaagcacgtcaagttcacctacgacctctacctg
gtgaccaatggaaaacacggcaagaagatcaacggcacctggaacggcatggtgggagag
gtggagacgaagaaggcccacatggcggtgggctccctcaccatcaacaaggagaggtca
gaggtcattgacttctcggtgcccttcatcgagacaggcatcagcgtcatggtatcccgt
agcaacggcaccgtctcgccctctgccttcctcgagcccttcagtgctgatgtgtgggtg
atgatgttcgtgatgctgctgctggtgtcggcgattgctgtgtttgtgtttgagtacctc
agccctgtgggctacaaccgctgtctggctgacggtagagagcctggaggaccctccttc
accatcggcaaggccatctggctgctatggggtctggtcttcaacaactctgtcccagtg
cagaaccccaagggttggaccagtaagatcatggtgtcggtgtgggccttcttcgctgtc
atcttcctggcctcctacactgccaacctggcagccttcatgatccaggaggagtatgtg
gaccaggtgtctggactcagcgacaagaagttccagagacccaatgacttctcccctccg
ttccggtttgggacggtccctaacggcagcacggaaaggaacatcaagaacaactacaag
gagatgcatggctacatgatcaagttccaccagaagaatgtggacgaggccctctatggt
ctgaagactggtaaactggacgccttcatctacgacgcagcagtgctgaactacatggcc
ggaagggacgagggctgtaagctggtgaccattggcagtgggaaagtgtttgcctccacg
ggctacggcatcgccatccagaaggagtctggctggaagagacacgtcgacctggccatc
cttcagctctttggagacggtgacatggaggagctggaggccatgtggctgacagggatc
tgccaccatgagaagaacgaggtgatgagcagccagctggacgtggacaacatggccggc
gtcttctacatgctgggggcggccatggctctgtcgctcatcaccttcatcgccgagcat
gccttttactggcaactgcgcttctgcttcatgggctactgcacgggcaagccaggcttc
gtcttctccatcagcaggggcatctacagctgcatccacggggttcagatcgaggagaag
agcagctcagctctcgactctccatcggtcaccatgaacaacacccaatccaacatcctg
cgtctgctccgaaccgctaagaacatggcctccctgtccggggttaacggctcacctcac
agcgccctggacttcatccgtcgtgagtcatccgtctacgacatctccgagcaccgccgc
agcctggcaggtcactcggactgcaagcctccgtacatgccggaggataacatgttcagt
gactacatcaacgaggtggagaggacgttcgggaacctccacctgaaggacagcaacctg
taccaggaccactacctgcaccaccacggaggctctgccctggggctcagcggcccgcca
cttaacagaccccacagcctgggcagcaacagctctctggaagggggcatgtttgactgt
gacagtttagggggaggagtggcacccatcttcaccacccagccacgctctgccctgacc
cacaggaacatgagtaagtttgacctgattgccggtcagaacccaccctccgggccaggc
ttcaaatcgggactttcagacctgtacggaaagttctctttcaagggaggggcctccagc
tcaggttacatccccgggcacgacaggtactgtgggggagggggcagagaggatgacgga
aacattcgttcagacgtttcagacatctccactcacactgtcacctacgggaacctggag
ggcaacgctaaaaagcgtaaacagtatcgcgacagcctgaaaaagaggcccgcctcggcc
aagtcgagacgagagctggatgagattgagctgggctaccggagaaagccctaccacaca
ggctaccaccactaccacggccaccgctcctcctccccgcccctactggcctccgaacgc
aagagaggaggagggggcaatgcagggagcacatcctacctgttccgtgacaaagagagt
gtgagggatttctatttggatcagttccgccccaaagatggtgtcccccaatgggaacat
gttgatctgacagacggtcctggaggggggggtggagggggcggggggaactgcaccagt
ttggtgtcagtggacgactttctgaaacaaaataaacccaaaaaatcagagtctaagagt
gggggaggcacatcaggggcggggttggcaggaggagactgggagtgtcgtaactgccgt
gccagcggaggagggggaaagcagatgtcgatgcatggcagcggggcgggggagagggga
ggtgggtacggtggaggggttagttgtggatcctcgggcggtggagggaacagccgtccc
agctctgccacctgcatgcgctgcgagggctgcaaaaagacaggcaacctgtacgacatc
agtgaggacaacaaccacctcttggaacagatggggggtgggaaaggcggaggcatggga
gctgtggggttaagtggaggcgcccaacctcaatctcaagcccagcgtaggaagtctgcc
ggctttggaaagcccctccgacggcaacactcgtgcgacaccttcgtagaccttcagaaa
gaggaggcagtcggagtcaggggggtcatgggggatctaggagggggcggtgggggcatg
gggggtgtaggaatgggcgggatgttgcctcctcccagaagtgttagcttaaaagagaag
gagcgctacatggagggtgttagccccttcgcccacatatttgagaggcatggaggctca
gagagggagaaggagcgagacagagaccccctgttctacggtggtgagatggccaaagaa
gcagggtcgccgttcggcttgttccgaggtggcgatggccttcaccgccgctcagtgggg
gagagggacatgagggacagagaaagagccatgatggaaggcggtggaggaggaacctac
tccttatccaaatctctctacccggatagggtcaaccaaaacccctttattccaaccttt
ggtgacgaccagtgtctcttgcatggcgccaaacaatactacatgaaaaagcaacagcag
cagcagcagatgccccccaaaaacagccgaagtgacttccggggctcggtgggtgtgacg
tctttcttgccagcgactgccactgctggggtcatgtccaccgtggcccccaggttccct
atggagctgtgtctgggagggaacctccacggctccacgctgggtgtggggccaatacag
cgtccgttcaatggcagcaacgggcacgtgtacgagaaactctccagcatagagtcagac
gtgtga
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