Salmo salar (Atlantic salmon): 106601274
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Entry
106601274 CDS
T04363
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K20995
Notch 3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04330
Notch signaling pathway
sasa04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106601274
04371 Apelin signaling pathway
106601274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
EGF_2
Notch
NODP
NOD
Ank_3
Ank_4
Ank_5
EGF_3
cEGF
EGF_DL_JAG
DUF7472
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
106601274
NCBI-ProteinID:
XP_014048834
UniProt:
A0A1S3RAS3
LinkDB
All DBs
Position
ssa03:complement(66701447..66744405)
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AA seq
2483 aa
AA seq
DB search
MGGNYKVWIFLPILFLVHNCEGFRCVDKYRPCDNGGTCIDSPSRCICRPGYIGPLCQSLD
PCHRSPCLNGAACKSQVANGMPQFTCVCQRGFRGQDCSLIDACATSPCANGARCASWNNH
YNCSCPPGFQGKNCRNDIDECRKSGVCLNAGLCMNTHGSFRCQCPPGYSGRTCEVSSLPC
APSQCINGGTCRPTGDHTYDCACLPGFEGHNCETNVDDCPGHRCMNGGLCVDGVNTYNCQ
CPPEWTGQYCAEDVNECLMQPNACHNGGTCFNTIGGHTCVCVNGWTGDDCSENIDDCATA
VCFNGATCHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAICTCPA
GFVGGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYAGPRCEIDINECLSMPCQ
NDATCLDRIGEFTCICMPGYEGVFCQINTDECASMPCLNNGKCIDRINSFHCECHKGFSG
GLCQVDIDECASTPCMNGAKCTDGPNKYSCECTEGYTGQHCETDINECYSDPCHYGTCKD
GLATFTCYCHPGYTGRLCETNINECLSQPCQNGGTCQDRENTYICTCPKGTTGINCEVNL
DDCKSKPCDYGTCLDKINGYECACEPGYSGTMCNINIDECDLNPCHNGGTCIDGINSFTC
LCPEGYHDTTCFFQVNECLSNPCIHGHCQDKVNGYNCLCDNGWSGKNCDINNNECESNPC
MNGGTCKDMTSGYVCSCRVGFTGPSCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYT
GENCETLLAPCSTKPCKNAGVCQESEDYENFSCVCPEGWQGQTCEVDINECVKNPCLNGA
TCENTKGNYRCGCKAGYAGRNCETNIDDCKPNPCSNGGFCRDEVDNFVCTCLPGFRGTKC
EEDINECDSNPCKNGANCTDCVNSYTCTCPSGFSGTHCENNTPDCTESSCFNGGTCLDGI
NTYTCLCPPGFTGSYCQHDINECDSRPCLNGGTCQDSYGTYKCTCPQGYIGLNCQNLVRW
CDSSPCKNGGTCWQTGTTYSCECQTGWTGLYCDVPSVSCEVAAKQRGVEVVALCRNSGQC
LDAGNTHYCHCQAGYTGSYCEEQVDECTPNPCQNGATCTDFLGGYSCKCVAGYVGTNCSN
EINECFSQPCQNGGTCIDLINTYKCSCPRGTQGVHCEINIDDCNPVTDQVTNEPKCFNKG
KCVDRVGGYHCICPAGYVGERCEGDVNECLSNPCDTRGTHNCVQLTNNYRCDCRTGYTGE
RCDTVFDGCKSKPCRNGGTCAVASNTPHGFICKCPPGYTGSTCEYDAHSCGNLHCRNGGT
CISGHKNPKCLCTSSFTGPECEYPTDNPCNTNPCYNGGTCEYSSEAPYYHCVCPTNFNGL
LCHILDYSFLGGFGRDITPPPEVEVSCEIPQCEETKGNKFCDMLCNNHACGWDGGDCSLA
VNPWARCTDLRCWRVFNNSQCDESCNNADCLYDNFDCKNKEKICNPIYEAYCIDHYADGR
CDQGCNSEECGWDGLDCAGKVPENLADGVLVLVVLLPPDELVNTAPAFLQKLSAILRTTL
RFRLDHNGEPMIRPYTRREARLKRELQPHQEVIGSIVYLEIDNRLCSQRSDDCFPSADSA
ADYLGALSAVEMLRFPFQIKEVRGEKIQDPLDMPEWGKLMLVGVAALFLLVILVVGVLIG
RRKREHSTLWFPEGFFPKKEPSSNKNRREPLGQDALGMKYMPKTVEESLLGDHSDSWMDT
DCPEAKRLKVEEPSILSESEDTVDCRQWTQHHLAAADIRMPPSMALTPPQGEFDQDCMDV
NVRGPDGFTPLMLASFCGGGLEPELPEEEESEECSANIISDLIYQGATLAAQTDRTGETA
LHLAARYARADAAKRLLDAGADANAQDNTGRTPLHAAVAADAQGVFQILIRTRATDLDSR
MYDGSTALILAARLAVEGMVEELITCHADINAVDELGKSALHWAAAVNNVEATMALLKNG
ANKDMQDLKEETPLFLAAREGSCEAVKILLAHFANREITDHMDRLPRDIAQERMHHDIVQ
LLDEYNTVRSPQGHGGAPHHLAGGHTLSPLMCPPSAFMPGLKNTPQGKKSRRPGAKGSGL
GGQHAQNLKDSAKARNKKLTLDMQSALLESSVTLSPVDSLDSPRGGANNAGYITNPCSPV
AMPSSGLFHSSMSVPSTPMVHSSMMDGSGPFAVSLAQLNDLGDGGMSMQGRVSMASQVNQ
GPHGYVLNAGQLGLNMGLVSPVSVPFDWHSRMPSSSQCGGQVVNLVHSSQAGMHPQSPMQ
QNSLMMQQHQQHQQHLYRSAQQAMLQPTPVIASTPISHSPVKLPSIAEQQQQLHNHSMAS
QQSLRMGTSSPPTPQTTQPPPAFFQQQQQPPQPQPAPQPTSPQASQAPPPQASGSTAGLE
DYPTPPSQHSYSALDATPKHYLRLSSEHPYLTPSPESPEPWSSPSPHCVSDWSDSTPSPA
VAGPAQTQISHVQESNGKMQVFA
NT seq
7452 nt
NT seq
+upstream
nt +downstream
nt
atgggggggaattataaagtttggatatttttaccaattttattcttggtccataattgc
gaaggattccgctgcgtggataaatacagaccttgtgacaatggaggaacgtgcatagac
tcaccctcgcgatgcatatgtcggccggggtacatcgggcctctgtgccaaagcctggac
ccctgtcacaggtcgccatgcctcaacggagccgcctgcaagagccaggtggccaacgga
atgccacaattcacctgtgtgtgccagagagggttcagaggtcaagactgctccctcata
gacgcctgtgccaccagcccctgtgccaatggcgcccgctgtgccagttggaataaccac
tataactgttcctgcccgcccgggttccaggggaagaactgccgcaacgatatcgacgag
tgccgcaagtctggcgtctgtctcaacgcaggcctctgcatgaacacccatggttccttc
cgctgccagtgcccacctgggtacagcgggcgcacctgcgaggtgtcctccctgccctgc
gccccctcccagtgcatcaacgggggcacctgccgcccgaccggagatcacacctacgac
tgtgcctgcctgccagggttcgagggacacaactgtgagacgaacgtggacgactgccca
gggcataggtgtatgaatgggggcctgtgtgtggatggagtcaacacctataattgccag
tgcccacctgagtggacaggtcagtactgtgcagaggatgtcaatgagtgccttatgcag
cccaacgcctgccataacggaggcacctgcttcaacaccatcggggggcacacctgcgtg
tgtgtcaacggctggacgggagacgactgcagcgagaacatcgacgactgtgccaccgcc
gtgtgcttcaacggcgccacctgccacgaccgcgtggcgtccttcttctgcgaatgcccc
gtggggaaaaccggtctgctgtgtcacctggacgatgcgtgcgtcagcaacccgtgtaac
gagggcgccgtgtgtgacaccaaccccctgaacgggcgcgccatctgcacctgtcccgct
ggcttcgtgggcggagcctgcaaccaggacatggatgagtgttccattggtgccaacccc
tgtgaacactttgggaagtgtgtgaacacggaggggtccttccagtgccagtgtggtcga
ggctacgccggcccccgctgtgagatcgacatcaacgagtgtctgtccatgccctgccag
aacgatgccacctgtctggaccgcatcggagagttcacctgcatctgcatgccaggttat
gagggggtgttttgccagatcaacactgacgagtgtgccagcatgccctgtctgaacaac
gggaagtgcatcgacaggatcaactccttccactgcgagtgccacaaaggcttctctggt
ggtctatgtcaggttgacatcgatgagtgtgccagcacgccctgcatgaacggagccaag
tgtaccgacggccctaacaaatactcatgtgaatgcactgaaggttacactggacagcac
tgtgagactgacatcaacgagtgttactcggacccctgtcactatggcacatgtaaggac
ggcctggccaccttcacctgctactgtcaccctggttacacgggccgcctgtgcgagacc
aacatcaacgagtgtctgagccagccatgtcagaacggaggcacctgtcaggacagggag
aacacttacatctgcacctgccccaagggcaccacaggtataaactgtgaagtcaacctg
gacgactgcaagagcaagccatgtgactacgggacttgcctcgacaagatcaacggctac
gagtgtgcctgtgagcccggctacagcgggaccatgtgcaacatcaacattgatgagtgt
gacctcaacccgtgtcacaatggtggcacctgcatcgatggcatcaacagcttcacctgt
ttgtgcccagagggttaccatgacaccacctgcttcttccaggtcaacgagtgccttagc
aacccctgtatccatggccactgtcaagacaaagtcaacggttacaactgtctgtgtgac
aatggctggagtggcaagaactgtgacatcaacaacaacgagtgcgagtccaacccctgc
atgaacggaggcacctgcaaggatatgaccagcggatacgtctgctcatgtagagtgggc
ttcactggtccaagttgtcagacgaacatcaacgaatgtgcctccaatccctgtctgaac
caagggacctgcatcgatgatgtcgctggctacaagtgcaactgcctactcccatatacc
ggtgagaactgtgagaccctgctggcaccctgcagcaccaaaccctgcaagaacgcaggt
gtgtgtcaggagtctgaggactacgagaacttctcctgtgtgtgtccagagggctggcaa
ggccagacctgtgaggtggacattaacgagtgtgtgaagaacccttgtctcaatggggcc
acctgcgagaacaccaaaggaaactaccgctgtggctgcaaggccggctacgctggccgc
aactgcgagaccaacattgacgactgcaagcccaacccatgcagcaatggaggtttctgc
cgggacgaagtggacaactttgtgtgcacctgcctgcctggtttccgtggcactaagtgt
gaggaggacatcaacgagtgtgacagtaacccatgtaaaaatggagccaactgtacagac
tgtgtcaacagctacacctgcacctgtccctctggcttcagtgggacacactgtgagaac
aacacgcctgactgcactgagagctcttgtttcaacggtgggacttgtctggacggcatc
aacacctacacctgcctgtgcccacctggcttcactggcagctactgccaacacgacatc
aacgagtgtgactccagaccctgcctgaacggaggcacctgccaggacagctatggaacc
tacaagtgtacttgtccccagggctacattggactcaactgccagaatctggtacgctgg
tgtgactcgtctccctgtaagaacgggggcacctgttggcagactggcaccacttacagc
tgtgagtgccagacgggctggacagggctctactgtgacgtgccaagtgtctcctgcgag
gtggcagccaaacaaagaggtgtggaggtagttgctctgtgtcgtaactcaggccagtgt
ctggatgctgggaacacccactactgccactgccaggcgggctacactggcagctactgt
gaggagcaggtggatgagtgcacccccaacccctgtcagaacggagccacctgcactgac
ttcctaggagggtactcctgcaagtgcgtggcaggatacgtcgggacgaattgctccaac
gagatcaatgagtgtttctcccagccgtgccagaacggaggcacctgcattgacctgatc
aatacctacaaatgctcctgtcccaggggaacccaaggcgttcactgtgagatcaacatt
gacgactgcaaccccgtcacagaccaagtcaccaacgagcccaagtgcttcaacaagggg
aagtgtgtggacagggtgggaggttaccactgtatctgtcccgccggctacgtaggggag
cgctgtgagggggacgtcaacgagtgcctgtccaacccatgtgacacccgcgggacacac
aactgcgtccagctcaccaacaactaccgctgcgattgccgtactggatacacaggagag
cgttgtgacacagtgtttgacggctgtaagagcaaaccctgtcgtaacggagggacatgt
gccgtagccagcaacactcctcacggcttcatctgcaagtgtccacctggatacactggc
tccacctgtgagtacgatgcccactcctgtggcaatcttcactgtcgtaacggtggcacc
tgcatctccggacacaagaacccaaagtgtctctgtacctcctcgttcacggggccagag
tgtgaataccccacagacaacccttgtaacaccaacccttgctacaacgggggaacctgt
gagtacagctcagaggctccgtactaccactgcgtctgccccaccaacttcaacggcctg
ctatgtcacatcctggactacagcttcctgggcgggttcggtcgtgacattacccccccg
ccggaggtggaggtgagctgtgagatcccccagtgtgaggaaaccaaggggaacaagttc
tgtgatatgctgtgtaacaaccacgcgtgtggctgggacgggggcgactgctcgctggcg
gtgaacccgtgggcgcgctgcaccgacctgcgctgctggcgtgtcttcaacaacagccag
tgtgacgagtcgtgcaacaacgccgactgcctctacgacaactttgactgcaagaacaag
gagaaaatctgcaatcccatctacgaggcgtactgcatcgaccactacgctgacggccgc
tgtgaccagggctgtaactcagaggagtgtggctgggacggtctggactgtgcagggaag
gttccagagaacctggctgacggggtgctggtcctggtggtcctgctacccccggacgaa
ctcgtgaatacggcccctgccttcctgcagaagctcagcgccatcctgagaaccaccctg
cgcttccgcctggaccacaacggagagcccatgatccgaccctacacccgccgagaggcg
cgcctcaaacgagagctgcagccccaccaggaggtcattgggtccatagtgtacctggag
atagacaaccgtctgtgttcccagcggtctgacgactgtttcccgtcggcagacagcgca
gcagactacctgggagccttgtcagccgtggagatgctccgcttccccttccaaatcaaa
gaagtccgcggtgagaagatccaagaccctttggacatgccagagtggggcaagctgatg
ctggtgggcgtggcagccctgttcctattggtcatcctggtggtgggtgtgctgattggc
cgcaggaagagagaacacagcaccctgtggttccccgagggcttcttccccaagaaggaa
cccagcagcaacaagaaccgcagggaacccttaggccaggacgcactgggcatgaaatac
atgcccaagacggtggaggagtctctgcttggcgaccacagtgactcgtggatggacaca
gactgccccgaggccaagagactgaaggtggaggagcccagcatcctgtcagaaagtgaa
gacactgtagactgtagacagtggacccagcaccacctagcggctgcagacatccgcatg
cccccctccatggccctcaccccgccccagggagagttcgaccaggactgcatggacgtc
aacgtccgaggacctgacggtttcacccctctgatgctggcgtcgttctgcggaggcggt
ctggagcccgagctccccgaggaggaggagtcagaggagtgttccgccaacatcatctcc
gacctcatctaccagggcgccacattggccgcccagacggaccgcaccggagagaccgcc
cttcacctggctgcccgctacgcccgcgctgacgccgccaagcggctgttggatgccggg
gccgacgccaacgcgcaggacaacacagggcgcacgccgctacacgccgccgtggccgcc
gacgcccagggggtcttccagattctgatccgaacccgggctacagacctggactctcgt
atgtacgacggctccaccgccctgatcctggctgcccgcctggccgtagagggcatggtg
gaggaactcatcacctgccacgcagacatcaacgctgtcgacgaactgggtaaatctgct
ctgcactgggcagctgctgtcaacaacgtggaggccaccatggccctgctgaagaacgga
gccaacaaagacatgcaggacctcaaggaggagacgccgctcttcctggcggcgcgtgag
ggtagttgtgaggcggtcaagatcctcctggcccacttcgccaacagggagataaccgac
catatggaccgtctgcctcgggacatcgcccaggagagaatgcaccatgacatcgttcag
ctgctggatgagtacaacacagtgaggagcccccagggccacggtggggccccacaccac
ctggccgggggacacaccctgtcccccctcatgtgcccccccagcgccttcatgcccggc
ctgaagaacaccccccaggggaagaagagtcgccgccccggggcaaagggttcaggtctg
ggagggcagcatgcccagaacctcaaggattcagctaaggcccgcaacaagaagctgacc
ctggacatgcagagcgccctgctggagagctctgtcaccctgtcccccgtcgactccctg
gactccccccgcggaggggccaacaacgccggctacatcaccaacccctgctccccggtc
gccatgccctcctcggggctcttccactcctccatgtcggtgcccagcactcccatggtg
cacagcagcatgatggacggctctggccccttcgctgtgtctctggcccagctcaacgac
ctgggagatggaggcatgtccatgcagggccgcgtgtccatggccagccaggtcaaccag
ggcccccacggctacgtgctcaacgccggccagctggggctcaacatgggcctggtgagc
cctgtcagcgtgcccttcgactggcacagccgcatgccctcctcctcccagtgcggggga
caggtggtgaacctggtccacagcagccaggcgggcatgcaccctcagagccccatgcag
cagaacagcctcatgatgcagcagcaccagcagcaccagcagcacctgtaccgcagcgcc
cagcaggccatgctgcagcccacgcctgtcatcgccagcacgcccatctcccacagcccc
gtcaagctgccctccatcgcagagcagcagcagcagcttcacaaccactccatggccagc
cagcagagcctccgcatgggcacctcctccccacccacaccccagacgacacagccccct
ccagccttcttccagcagcagcagcagcctcctcagccccagccagcccctcagcccacc
tctccacaggcctcccaggcccctcctccccaggccagtggcagcactgcaggcttggag
gactaccccaccccgccctcccagcacagctactccgccctggatgccacccccaagcat
tacctccgcctgtccagcgagcatccctacctgaccccctccccagagtcgcccgagccc
tggtccagcccctccccccactgtgtgtctgattggtcagactccacccccagcccggca
gtggccggtcctgcccaaacccagatttcccatgtccaggagtccaacggcaagatgcag
gtgtttgcatga
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integrated database retrieval system
