KEGG   Salmo salar (Atlantic salmon): 106601422
Entry
106601422         CDS       T04363                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03013  Nucleocytoplasmic transport
sasa03015  mRNA surveillance pathway
sasa03040  Spliceosome
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106601422
  09122 Translation
   03013 Nucleocytoplasmic transport
    106601422
   03015 mRNA surveillance pathway
    106601422
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106601422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106601422
   03041 Spliceosome [BR:sasa03041]
    106601422
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106601422
    TREX complex
     106601422
Spliceosome [BR:sasa03041]
 Complex C
  Other components
   EJC/TREX
    106601422
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106601422
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 106601422
NCBI-ProteinID: XP_014049104
UniProt: A0A1S3RBI7
LinkDB
Position
ssa03:71032680..71036088
AA seq 263 aa
MADKMDMSLDDIIKQNRQQRGGAGGRGGGRGRGRGGSGGGRGGGVGRGAAGGFGGRGGGS
GPMRNRPNLSRGRARPTPYSRPKQLPDKWQHDMYGNHGFNASVGGGAGVETGGKLLVSNL
DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG
RPMNIQLVTSQIDTQRRPPMQGMNRGGGMNRARGGGFRGMQRGRGAGRGGGRGRGGRGGS
TKPLSAEELDAQLDAYNARMETS
NT seq 792 nt   +upstreamnt  +downstreamnt
atggccgataagatggatatgtctctagacgacatcatcaagcagaacaggcagcagaga
gggggcgcaggaggccgtggtggtggaagaggacgtggccggggaggctctggcgggggc
cgaggtggtggtgttggccgtggagcagctggaggctttgggggccgaggtggaggatcg
ggccccatgaggaaccgaccgaacctgagccgtggcagagcaagacctacgccatacagc
aggcccaagcagcttcctgataaatggcaacacgacatgtacggcaatcatggcttcaat
gccagtgttgggggtggcgctggtgtggaaaccggagggaagcttcttgtctccaatctc
gactttggtgtttcagacgcagatattcaggagctctttgcggagtttggtacactgaag
aaggcagctgtccactatgaccggtcgggcaggagcttaggcactgcagacgtccacttt
gagaggaaagcagatgctctaaaagctatgaaacagtacaacggtgtaccacttgatggg
cgtcccatgaacatacaactcgtcacatcacagatcgacacacaaagacgaccacccatg
cagggtatgaaccgaggcggtggcatgaacagggctcgtggtggtgggtttagagggatg
cagagaggacgtggagcaggtcgtggaggaggcaggggccgaggtggccgtgggggaagc
actaagccactttccgctgaagagctggatgcccagctagatgcctacaatgccaggatg
gaaacaagctaa

DBGET integrated database retrieval system