Salmo salar (Atlantic salmon): 106601536
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Entry
106601536 CDS
T04363
Name
(RefSeq) DDB1- and CUL4-associated factor 7-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106601536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106601536
03036 Chromosome and associated proteins [BR:
sasa03036
]
106601536
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106601536
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
106601536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
MIOS_WD40
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
WD_LRWD1
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
106601536
NCBI-ProteinID:
XP_014049265
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All DBs
Position
ssa03:complement(74742034..74747801)
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AA seq
304 aa
AA seq
DB search
MAVFLGKIVQIVGLEEESSEFICRNPFDHPYPTTKIMWIPDSKGVYPDLLATSGDYLRIW
RVSETETRLECLLNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGR
VNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYED
PQHHPLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHS
SCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAIGYNNCLE
ILRV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgttcttaggcaagattgtgcagattgtgggtctggaggaggagagttcagag
ttcatctgcaggaacccctttgaccacccctaccccaccaccaagattatgtggatcccg
gacagcaagggtgtttacccagacctgcttgccactagcggggactacctgcgcatctgg
agggtcagtgaaacagagacgcgtttggaatgcttgctgaataacaacaagaactctgac
ttctgtgccccactcacctcgtttgactggaatgaagtggatcctaatctactgggcacc
tccagcattgacaccacctgtactatctgggggttggagactggccaagtgctgggcaga
gtcaaccttgtctccggccacgtcaagacccagctcattgctcatgacaaagaggtgtat
gacatcgcgttcagccgcgcaggcggtggtcgggacatgtttgcgtcggtcggcgcggac
ggctcagtacgcatgtttgacctgcggcacctggaacacagcaccatcatctatgaagat
ccccagcaccaccccctactgcgcctctgctggaacaaacaggaccccaactacctggcc
accatggctatggacggcatggaagttgtgattctggacgtgcgtgttccctgcacgccg
gtggcccgcctcaacaaccaccgggcctgtgtcaacggcatcgcctgggctccccactcc
tcctgtcacatctgcactgcagccgacgaccaccaggcgctgatatgggacatccagcaa
atgcccagggccatcgaggaccctattctggcctacacagctgagggggagatcaacaat
gtccagtgggcctccacccagcctgactggatcgccatcggctacaacaactgcctagag
atcctgcgggtctaa
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