Salmo salar (Atlantic salmon): 106601542
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Entry
106601542 CDS
T04363
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecule (CAM) interaction
sasa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
106601542
04517 IgSF CAM signaling
106601542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106601542
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
NGL family
106601542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_14
ig
LRR_1
V-set
Ig_2
LRR_NXF1-5
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
106601542
NCBI-ProteinID:
XP_014049304
UniProt:
A0A1S3RAZ7
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All DBs
Position
ssa03:complement(75345840..75376139)
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AA seq
730 aa
AA seq
DB search
MRITTVTCLPCPSPLLLLLVQLLLRLLLSGPEFVEAASPCPTHCSCSNQASRVICTRQSL
DGVPESISVNTRYLNLQENSIEVIKSDTFKHLRHLEILQLSKNKISQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVKVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTTMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADVGVSYFTTVTVETVEPNEGPTVYAGVMNSHNESYVITPSG
HQWRGGVPTTASSLSAWSLSSSRATRPTFTAPITAETGYSGLDDVMKTTKIIIGCFVAIT
FMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGAGGRGSGISGGGTVSRDGG
GVGGGQSLRMHHPEMVNLPNLARQEHLNHYYKAHHFNNNMMGLGMGLNNNNNPSLSPCSQ
TQSTPNSCAQGPTSTSGSTPTGGSLPSPVPLPQLGIHSSLKGLMGKGQNPQIEPLLFKSG
SKENVQETQI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgacctgccttccctgcccctcccccctcctcctcctattggtc
cagctgttactgcggctcctcctgtctgggccagaatttgtagaggctgcctccccctgc
cccacccattgcagctgctccaatcaggccagtcgagtcatctgtacgagacagagtctg
gatggggtgcctgagagcatatcagtcaacacacgatacctcaacctgcaagagaattca
atagaggttatcaagtcagacaccttcaagcacttgaggcaccttgagatcctgcagctg
tctaaaaacaaaatcagtcagattgaggtgggagcattcaatggcctgcccaacctcaat
acgctggagctgttcgacaaccgcctcaccctggtcccctcacaggccttcgagtacctc
agcaagctgcgggagctgtggttacggaacaaccccatcgagacgctgccgggctacgcc
ttccaccgcgtgccctcgctgcgccggctggacctgggagagctcaagaagctggactac
atctcagacgccgccttcgtgggcctggtcaacctgcgctacctgaacctgggcatgtgt
ggtctgaaggacatccccaacctgacggccctggtgcgtctggaggagctggagctgtct
gggaaccgtctggagatcatccggcctggctccttccagggcctggtgtcgctccgtaag
ctgtggctcatgcactcgcaagtgaaggtcatcgagcgcaacgccttcgacgacctgaag
aacctggaggagctcaacctttcccacaactccctgcactcgctgccccatgacctcttc
accccactgcaccagctggagcgggtgcacctcaaccacaacccctgggtgtgcaactgt
gacgtgctgtggctcagctggtggctgaaggagacggtgcccagtaacactacgtgctgc
gcccgctgtcacgctccccccggcctgaagggccggtacatcggggagctggaccagagc
cacttcacctgctacgctcccgtcatcgtggagccgcccaccgacctcaacgttaccgag
ggcatggctgcagagctgaagtgtcgcacgggcaccaccatgacctcagtcaactggctc
acgcccaacggcaccctgatgacccacggctcctaccgggtccggatctccgtgctgcac
gacggtacgctcaactttaccaacgtcacgctgagggacacgggtcagtacacctgcatg
gtgaccaactcggctggcaacaccacggcaaccgccgtgcttaatgtcactgccgccgac
gttggcgtcagctacttcactactgtcaccgtggagacggtggagcccaacgagggcccg
acagtctacgcgggcgtcatgaacagccacaatgagtcatatgtcattaccccgtctggc
caccagtggagggggggggtccctaccaccgcctcctccctgtcagcctggtccttgtcc
tcgtcccgggccacccggcccacctttactgcgcccatcactgccgagacgggctattct
ggccttgatgacgtgatgaagaccaccaagatcatcattggctgcttcgtggccattacc
ttcatggcagccgtgatgctggtggtcttctacaagctgaggaagcagcaccagctgcac
aagcaccacggccccgcccgcgccatcgagatcatcaacgtggaggacgagattggcgcc
ggtgccggtggacgcgggagcggcatctcagggggcggcaccgtctctcgggatggggga
ggagtaggaggagggcagagcctgaggatgcatcacccggagatggtcaacctgcccaac
ctggccagacaggagcacctcaaccactactataaggcccaccacttcaacaacaacatg
atgggcctgggcatgggcctcaacaacaacaacaacccctccctctccccttgttcccag
acccagagcacccccaactcctgcgcacaggggcccacctccactagtggtagcaccccc
acgggtggctcgctgccctcccctgtgcccctgccccagctgggcatccacagctctctg
aaggggctcatggggaaaggccagaaccctcagatcgagcctctgctcttcaagagtggc
tccaaggagaatgtgcaagagactcagatctga
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