Salmo salar (Atlantic salmon): 106601545
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Entry
106601545 CDS
T04363
Name
(RefSeq) TBC1 domain family member 17-like
KO
K19945
TBC1 domain family member 17
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106601545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106601545
Membrane trafficking [BR:
sasa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106601545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
106601545
NCBI-ProteinID:
XP_014049309
UniProt:
A0A1S3RAC2
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All DBs
Position
ssa03:complement(75204426..75216716)
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AA seq
641 aa
AA seq
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METKAETSHKLVFEKEGVYLHTNAKRSNQDTTIPGFIRIVERGGEPALEWSALEDEGRNA
AAVFYTKKDGEGGVEDTNFDPGYEPDWAVISTVKRDRVREHPPVKETSQWSFSLPLSELY
SLRRSRFSLGRNFLVFTSRGGHPLPPLHFHRGGTRELLRALQRYIILAPSPVDGRLFLAY
PHDSGALSQSFDELHLFDDGSSDLVSRFIQDPYATTFGGFSKVTNFFRGALRPPDSPFHP
RGPQDHHGPPSADDEPGFELITCGVELGPKPDVTRGQPLDKWEEFLDPEGRVKDPQRIKE
LVFRGGITPSLRKDVWKFLLGFYPWNSTVKEREDILRMKTDEYFRMKVQWKSVSEEQEMR
NSLLRGYRSLIERDVSRTDRHNTFFSGNDNPGLTLLNDVLMTYCMFNFDLGYVQGMSDLL
APLLFVTQNEVESFWCLTGFMEMVHQNFEESQEAMKQQLLQLSLLMKALDPELLDYLDSQ
DSGSLCFCFRWLLIWFKREFSFEDILSLWEVLWTRLPCENFHLLMAASILESQRGEFIGS
DHDFNTILKHINELTMKLDLQTVLRGAEANYLQLACCKELPVKVQEVIGLYVPPSPDDET
SPESESHETQQLLSQSQAEATETSQSSNSTAAAARPRPTYP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaggccgagactagtcacaagctggtgtttgagaaggagggggtgtacctt
cacaccaatgccaagaggagcaaccaggacactacaatcccaggattcatccgtatagtg
gaacggggtggggagccagctttggagtggagcgcactagaggacgagggccgcaatgcg
gctgctgtattctacactaaaaaggatggagaaggaggggtggaggacaccaactttgac
cctggctacgagccagactgggcagtcatcagcacagtgaagagagaccgagtcagagag
cacccccccgtcaaagagacaagccagtggtcgttctccctgcctctgtcggagctgtac
tctctgcgacggtcccgtttctccctgggccgtaacttcctggtttttaccagcaggggt
ggccaccccctccctcctctgcacttccacagggggggtaccagggagctgttgagggcc
ctgcagcgttacatcatcctggccccatcacctgtagatggtcgtctcttcctagcgtat
ccccatgactctggggctctctctcagtcctttgatgagctgcacctctttgacgatgga
agctccgacctcgtctctaggtttatccaggacccttatgccaccacctttgggggattc
tccaaggtcaccaatttcttcagaggggctctacgaccaccagattcccccttccacccc
cgtggccctcaggaccaccatgggcccccctcagctgacgacgaaccaggctttgagctc
atcacctgtggggtggagcttggccctaaaccagacgtaaccaggggacagcctctcgac
aaatgggaggagttcctggacccagaggggcgtgtgaaggacccacagcgaatcaaagag
ctggtcttcagggggggtatcacaccatccctgaggaaggacgtgtggaagtttctgctg
ggtttctatccctggaatagtactgtgaaagagagggaggacattctgaggatgaaaaca
gatgagtatttcagaatgaaggttcagtggaagtcagtcagtgaagagcaggagatgagg
aactccctcctcagaggataccgcagcctgatagaaagggacgtgagtcgaacggacaga
cacaacaccttcttctctggcaacgacaacccaggcctgactcttctcaatgacgtgctg
atgacatactgcatgttcaactttgatctgggctatgtccaggggatgagtgacctcttg
gctcctctcctgtttgtcactcagaacgaagtggagtccttctggtgtctgacaggtttt
atggagatggtgcaccagaactttgaggagtctcaggaggccatgaagcagcagctcctt
cagctcagcctgctgatgaaggctctggaccctgagctccttgactacctggactcccag
gacagtggctctctgtgcttctgtttccgttggttactgatctggtttaagagagagttc
tccttcgaggacatcctgtccctttgggaggttctttggactcgtctgccctgtgaaaac
ttccatctgctgatggccgcttccattctggaatcacagaggggggagttcatcggctct
gaccacgacttcaacactattttgaagcacatcaatgaactgaccatgaagctggatctg
cagacagtcctacgaggagcagaagctaactacctacagctggcctgctgcaaagagctg
ccggtgaaggtgcaggaggtcattggtctgtacgttccccccagccctgatgacgagacg
agcccagaatcagagtcacatgagacgcagcagcttctcagccaatcacaggcagaagct
acggaaacgagccagtcaagtaacagcactgctgctgcagcacgccctcgtcctacctac
ccgtaa
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