KEGG   Salmo salar (Atlantic salmon): 106601810
Entry
106601810         CDS       T04363                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106601810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sasa03009]
    106601810
Ribosome biogenesis [BR:sasa03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    106601810
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Utp13 Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st PEP5_VPS11_N NBCH_WD40 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_Vps41 WDR54 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 106601810
NCBI-ProteinID: XP_014049679
LinkDB
Position
ssa03:82153735..82180366
AA seq 809 aa
MAKSNLQFKTNYAVSSTIEPFYKGGKVQISKDEKFIFCTCGTRVNVLQIVTGKIVHSIEQ
DDQEDITSFALSLDDEILVTASKALLLKQWDWKQAQCTRSWRAIHNVPIASMTFDPTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVEFHPDISLLQLFSSASDCGIRMWDLR
SSQCLCVLQSHYSPVTSLAFTSDGASMVSSGRDKICTVWDLKSRTARRTVPVYEAVESVV
LLPEDEDFSEIGVKTKEIHFITAGSKGVLRVWDASSARCVFAQTLPSAPPAGGSEEGGEE
YGDPRSLTYCLPLPSSLRLATVTAEHNILLYQLPSFTAQQQFVGFNDEVLDVKFLGKGDT
HIVVATNSSQLKVFDLATSSCKILYGHTDTVLSLDVFKKGSLFVSCAKDKSVRVWRQDPD
SGQVCCVAQGCSHGNAVGSITCSRMKESFVVSGSQDCTIKVWDLPETIPETDGDMFQLTA
RVTEKAHDKDVNSVAVSPNDKLLVSGSQDRLAKLWSLGAPGADLALLGVFRGHRRGVWCV
QFSPMDQVLASSSADGSVKLWSLQDFSCLKTFEGHDASVLKLIFVSRGTQLLTSGSDGLV
KLWTIKTNECVKTLDAHQDKVWGLHATRKDDRVVTASADSNITVWTDVTEVEQAEEQAKQ
EDQILKKQELSNLLHEKKFLKALGLAISLDQPHTVLKVIKAIRQGEDGAKQLEKTVLKLR
QDQKESMLRYCAMWNTNARSCLDAQAVIQVMLTHLSPEELLQYQGARAHLEGLIPYTERH
MQRIGRLLQASMFLDYMWQKMRVTGAPAR
NT seq 2430 nt   +upstreamnt  +downstreamnt
atggcaaaaagcaatctccagttcaagaccaactatgctgtttccagcactatcgaacca
ttctacaagggaggaaaagtacagatcagtaaagatgagaaatttatattttgtacgtgt
ggcacacgtgtcaacgtcttgcaaatcgtcactgggaagattgttcacagtattgaacag
gatgatcaggaggacattacatcattcgccctcagccttgatgatgagatcctggtaaca
gccagcaaggctctgctgctgaagcaatgggactggaagcaggcccagtgcacacgttcc
tggagggccatccacaacgtgcccattgccagcatgacctttgaccccacctccacgctc
ctggccacaggaggctgtgatggcaccataaagctgtgggacgtggtgaagcagtactgt
acacacaacctgaagggctcctctggggtcgtacacctggtggagttccatccagacata
agtctactgcagctcttctcctcggcgtcagactgtggcatcaggatgtgggacctgcgc
tccagccagtgtctgtgcgtgctgcagagccactacagccctgtcacctccctggccttc
acctccgatggagcctccatggtcagctctggcagggacaagatctgcacagtgtgggat
ctgaagagcaggactgccaggaggacagtgcccgtctatgaggctgtggagagtgttgtg
ctgctccctgaggacgaagatttctctgagatcggggtgaaaactaaagagatccacttc
atcacagcaggcagcaaaggtgtgctgagggtgtgggatgccagctcggcccgctgtgtg
ttcgcccagacgctcccctctgctccccccgcggggggctctgaggaggggggggaggag
tatggagacccccggagcctcacctactgcctccccctgccctcctccctcaggctggcc
acagtcacagcagaacataacatcctgctctaccagctgccctccttcaccgcacagcaa
cagtttgttggcttcaatgatgaggtcctggatgtgaagtttctgggcaagggtgacact
cacattgtcgtggcgaccaacagctcccagctcaaggtgtttgacctggccaccagcagc
tgtaagatcctctacggacacacagataccgtcctgtcactcgacgtgttcaagaaagga
tccctgtttgtgagctgtgcaaaggataagtcagtgcgtgtgtggagacaggatccagac
agtggtcaggtgtgttgtgtggcccagggctgcagccatggtaacgctgtgggctccatc
acctgctccaggatgaaggagtcgtttgtggtgtctggtagtcaggactgcaccatcaag
gtgtgggatctcccagagaccatcccggaaacagacggtgacatgttccagctgaccgcc
cgggtcacagagaaggcacacgacaaagatgtgaacagcgtggcagtgtcccccaacgac
aagctcttggtgtctggttcccaggaccgcctggccaagctgtggtccctgggggccccc
ggagccgacctggccctgctgggggtgttccggggccaccgccggggggtctggtgtgtc
cagttctctcccatggaccaggtgctggcatcctcctcagccgacggctctgtcaagctc
tggagcctccaggacttcagctgcctcaagacgtttgaaggccacgatgcctctgtgctg
aagctcatctttgtgagcagagggactcagctactcacaagtgggtcagatgggctggtc
aagctgtggaccatcaagaccaatgagtgtgtgaagacgctggatgcccaccaggacaag
gtgtggggtctccacgccaccaggaaggacgaccgtgttgtcaccgcctcggccgactcc
aacatcactgtgtggacggacgtgacagaggtggagcaggcagaggagcaggcgaagcag
gaagaccagatactcaagaaacaggagctgtctaacctgcttcatgagaagaagttcctg
aaggctctgggcctggccatctccctggaccagccacacactgtgctcaaagtcattaaa
gcgatccgccagggggaagatggtgctaagcagctggagaagactgtgctgaagctgcgc
caggaccagaaagagtctatgctgcgctactgtgctatgtggaacaccaacgcccggagc
tgtctggacgcccaggctgtgatccaggtgatgctcacacacctctcccctgaagagctg
ctccagtaccaaggagcacgcgcacacctggagggactcataccttacactgagagacac
atgcaaaggataggccgtctgctgcaggcctccatgttcctggactacatgtggcagaag
atgagagtgacaggagctccagccaggtga

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