Salmo salar (Atlantic salmon): 106601855
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Entry
106601855 CDS
T04363
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106601855
03015 mRNA surveillance pathway
106601855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106601855
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106601855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
SR-25
Nup35_RRM_2
RRM_5
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
106601855
NCBI-ProteinID:
XP_014049745
LinkDB
All DBs
Position
ssa03:83693242..83700898
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AA seq
246 aa
AA seq
DB search
MAPSPTKRKEEEKSKDRGKEKTATKEGGDKERGREKGHKRRSASTGSSSSSSSSSGSSSG
SSSGSSSSGTSRSGSSRSSSSSSSSSSGSPDPGRRRHDNRRRSRSASKTQKKGDDKERRR
RSPSPKPTKVHLGRLTRNVTKDHIQEIFATYGKIKMIDMPVERLHPNLSRGYAYVEFETP
EEAQKALKHMDGGQIDGQEITTSAVLAPRIRPPPRRQSPPRRMPPPPPMWRRTPPRMRRR
LVLALV
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcacccacaaagcgtaaggaggaggaaaagtcaaaggacaggggaaaagag
aagactgccactaaagaagggggggacaaggagagaggcagggagaagggccacaaacga
cgcagtgcatccactgggagcagcagcagctccagcagcagctctggctccagctctggt
tcctccagcggctctagttcctctggcaccagccgctctgggtcttccaggtccagctcc
tccagctcatctagttcctctgggtcgcccgaccccggccgccgccgccacgacaaccgt
cgccgctcccgctccgcgtcaaaaacacagaagaagggggatgacaaggagcgaaggaga
aggagcccgagccccaagcccaccaaagttcacttaggaagactgaccagaaatgtgacc
aaggaccacatccaggagatctttgccacctacggcaagatcaagatgattgacatgcca
gtggagaggctccacccaaacctgtcccggggctacgcctatgtggagttcgagactcca
gaggaggcccagaaggccctgaaacacatggatggtggtcagattgatggtcaggagatc
accacctctgccgtgctggctccaaggatacgccctccccctcgcagacagtcaccccca
cgcagaatgcccccacctccccccatgtggcgccgcaccccacctcgcatgaggagaagg
ttagtgttggccctggtctga
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