Salmo salar (Atlantic salmon): 106601938
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Entry
106601938 CDS
T04363
Symbol
npas3
Name
(RefSeq) neuronal PAS domain protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106601938 (npas3)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106601938 (npas3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
106601938
NCBI-ProteinID:
XP_014049855
UniProt:
A0A1S3RDC3
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All DBs
Position
ssa01:35025101..35332731
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AA seq
1023 aa
AA seq
DB search
MIRIFPDFSVQVTAAGGGAGGMPSGPAVGRIPGTTNGNPQNVQGITSYQQREIKTLHPFC
MEGSEEEAVVDAQFMSKFPHDPYWERPANTSSCSASRPKTLHLGGQQHTSSPWLQALRKE
KSRDAARSRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPW
NLRIEGPPPNTSVKAIGVQRRRTPSAVASEIFEPHLGSHILQSLDGFVFALNKEGRFLYI
SETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTATEDGASSA
SSSSHAETPEPVESTSPSLLSPDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHVTGRLR
IRMALTHSRSVPIQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLNIVYCENRISDY
MDLTPLDIVGKRCYQFIHAEDVEGIRHSHLDLINKGQCVTKYYRWIQKNGGYIWIQSSAT
IAINAKNANEKNIIWVNYVLSNPEYKDTPMDIAQLPNLPEKASESSETSDSESESKENSE
DNENSKSDGKGNQTENSEDPETDSKKQQQGQSSSEQEMRRQEEGDSSSNPESQESEDDLE
PSDCELETKESRLGRLGGLHIKVEHYGDRDGRVELHNSPSSSEEEEDDDDDEEDDDDDDS
VKDCDRATEMLAAPAASKQQKRKKRRKKQKWDGSRSRRLRLSSATTSPGTMNHPTLLLPP
SPASASVLKIKTEMSEPINFDNDSSIWNYPPNREISRNESPYSMTKHVPTHDTFPSPQPG
SLQVSIPDSVLTPPGTEGGGGGGGTRKGVPPSFNGNSSAPSSASSVASLAPPSSSGSSSD
PLSPPLSASPRDKQQGQGTPTTSNSSSSLLYTSDLEALQRLQAGNVVLPLVHRVTGTLAT
TSTAASRVYTTGTIRYAPADVTLAMQAGANLLPNNVAHAMNFVDVNGSPGFGIDPKTPME
MLYHHVHRLNMAGPFGGAVSGASLTQMPATNVFTTAEGLFSTLPFPVYSNGIHTTQTLER
KED
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgatccggatcttcccggatttcagcgttcaggtgacggcggcaggtggaggagccggg
ggaatgccatcaggtcctgcggtggggagaatccccggtaccactaacgggaacccgcag
aacgtccaggggatcacgtcctatcaacaaagggaaattaaaaccctacaccctttctgc
atggagggatcagaggaggaggccgtagttgatgcccaattcatgtccaaattcccccac
gacccttactgggagaggcctgctaataccagctcgtgttcagcctctaggcccaagaca
ctccaccttggagggcaacaacatacctcatcgccatggttgcaggctctgaggaaggag
aagtcccgggatgcggctcgctcgcggcgggggaaggagaactttgagttctatgagctg
gccaagatgctgcccctgcccggggccatcaccagccagctggacaaggcttccatcatc
cgcctcactattagctacctgaagatgagggacttcgccaaccagggggacccaccatgg
aacctgcgcatagaaggcccaccacccaacacctccgtcaaagctataggagtacagcga
aggaggactcccagtgcagtagcctcagagatcttcgagccacacctcgggagccacata
ttgcagtccctggatggatttgtatttgcactaaacaaggagggaaggtttttgtacatc
tctgagacggtgtccatatacctgggactttcacaggtggagctgacaggcagcagtgtg
tttgactacgtccaccctggcgaccacgttgagatggcagagcagctgggcatgaagctg
cctccaggccgaggcctcctctctcagggcactgccacagaggacggcgccagctctgcc
tcctcctcctcacacgcagagacccccgagccagttgagtccaccagccccagcctgctt
tccccagacaacactctagagcgctccttcttcatccgtatgaagtccacactgaccaag
agaggtgtccacatcaagtcttcaggctataaggtgatccatgttacaggcaggctgaga
atccggatggcattgacccacagtcggtctgtacccattcagatcatgggcatggtggtg
gtagcccacgccctcccccctcccaccatcaacgaggtgcgcatagactgccaaatgttt
gtcaccagggtcaacatggacctcaacattgtctactgcgagaatagaattagtgactac
atggacctgacgccattggacatcgtagggaagaggtgttaccagttcattcatgcggag
gacgtggagggcatccggcacagccatttagacttgataaacaagggacagtgtgtgacc
aagtactaccgctggatccagaagaacggtgggtacatctggatccagtccagtgccacc
atcgccatcaatgccaagaacgccaatgaaaagaacataatctgggtcaactacgtactc
agtaatccagagtacaaggacactccaatggacatcgcccagctgcccaaccttccagag
aaagcctctgagtcttcagagacttccgactccgagtccgagtccaaggagaactctgaa
gacaacgagaactcgaagtcggacgggaaggggaaccagactgagaacagcgaggacccg
gagacagacagtaaaaagcagcagcagggccagtcgtcctcagagcaggagatgaggcgt
caggaggagggagacagctcctccaacccagagagccaggagagcgaggatgacctggag
cccagcgactgcgagctggagaccaaggagagcagactaggccgactggggggcctgcac
atcaaggtggagcactatggagatagagatggaagagtggagctgcacaactcgccgtcc
tcctctgaagaagaggaagatgatgacgatgatgaggaagatgatgatgatgacgacagc
gttaaagactgtgacagggccactgagatgctcgccgcccccgccgccagcaagcagcag
aagcgtaagaagaggaggaaaaagcagaagtgggacggtagtcgttctagacgcctgcgc
ctctcctctgccaccaccagccctggcaccatgaaccaccccaccctcctgctgcccccc
tcccctgccagtgcatccgtgctcaagatcaaaacggaaatgtccgagcccatcaacttc
gacaacgacagcagcatctggaactaccctcctaacagggagatctccaggaatgagtcc
ccctacagcatgacgaagcacgtcccaacccacgacacctttccctccccacagcctggc
agtctgcaggtctccatcccagactcagtgctcactcccccaggaacagagggaggaggc
gggggtggaggaaccaggaagggcgtacccccctccttcaacggtaacagcagcgccccc
tcctcggcctccagcgtggccagcctggcccctccctccagctctggctcctcctccgac
cccctgtccccacccctctcagcctcgccgcgcgacaagcagcagggtcagggcaccccc
accacctccaactcctcctcctccctgctgtacaccagcgacctggaggccctgcagagg
ttgcaggctgggaacgtggtgcttcctctggtccaccgggtcaccggcacccttgccacg
accagcactgccgcctcccgggtgtacaccactggcaccatccgctatgcccccgccgac
gtcaccttggccatgcaggcaggcgccaacctgttgcccaacaacgttgcccacgctatg
aactttgtggatgtcaacggtagccccgggttcggcatcgaccccaagacgcccatggag
atgctgtatcatcacgtccaccggctcaacatggctggcccctttggcggtgccgtgtcc
ggcgccagcctcacccagatgccagcaaccaatgtattcaccacggcagagggactgttc
tctactcttccattccctgtctacagtaacgggatacacaccacacaaactctggagcgc
aaagaagattaa
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