Salmo salar (Atlantic salmon): 106602030
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Entry
106602030 CDS
T04363
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sasa04054
]
106602030
Pattern recognition receptors [BR:
sasa04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
106602030
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
106602030
NCBI-ProteinID:
XP_014049954
UniProt:
A0A1S3RDW3
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All DBs
Position
ssa03:90560925..90564725
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AA seq
1027 aa
AA seq
DB search
MRAMFSHPAVLFLWIQSTSGWMHPKCRIYDSGEDLGHFPTWICSYLPRHAEHYTAACEDV
TAIEEDLLGLPPNINTLCVCMTDGENNLMSLGFFSQFQDLEYLYIKGCFTQILPSGKSHL
PNLQYLHLDGMGSGCCDCHTGPHTFRDLVKLSHLTIWGYRLSAMAPDVFHGMTQVQSFII
SEPCVDDLSEILCRIMNIKSLIKLNIEALEIQSLNQSNCSILNTNESMTPVFNNLAISDF
SFGEITHVEEGALAWLQNLTRLTGAFSQEVLLRLPLSGIQQIRYFSCSGSNEIDIESICN
VVFLLSIKTLYLYNGNTSSLSMSSVELCIGLEYMYLGGPGFFHSTLYLEWHFISSLKNLI
QLTIDGLKDNRLDICSFQKQPIKSLTKLTLELNNIQMLFAKQFICFGNLLYLDLADNSIS
NIEDFAFLGLTNLESLDISRNKITQINTNTFFGLQLTKLTLRLNKLHMLFAKQFSCLVKL
QHLDLTQNLISNIEDFAFHGLTNLVSLDITKNKITQINANTFFGLHSLTWLDLRNNPLIH
NIEAMSFTHLTSLRQVFLGQVHNPLIEPVIKLNLTLIFGGILSQLTHLYISSAMRPMQLI
IGSNITSKQNLSLQLKGQTVSFQDCDRPFFQSVTHLHAEAEEFLCGSEFMGKYFTSVETF
DYRSKLSAKSVDLTSINQLIHLRKLTLRQVDLLIQRSADIIFHNLTKLEVLEMYHCRIYS
LEGSLTKDLKSLKTLYLHIENIYNVFYSFTEPLSSLKYLILPQIQIFCSCDNAWIITWAK
VYRQVEVIMLTPYTNPVMYALEDLICLSDNGIDTPNFVRYTEANCTTEVGFVLFAATGLG
VLFFMLVVLVHNLAGPYLLPLYHITLGWLSEAMRSNTRGRYHYDAFVSYSGKDESWVVEE
LLPNLEQRGPPFLRLCLHSRDFQLGKDIVENITDSLYRSRHTLCLVSRHYLRSNWCSLEM
KLATSRLQVEQRDILLLVFLEKIPPRQLSTHHRLARLVKTRTYLDWPQDPDQHQAFWDRL
WAKLSEA
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagagctatgttttcccaccctgccgtcctgttcctgtggattcagagtactagtgga
tggatgcatcctaaatgccggatttatgacagtggtgaagacttgggacactttcccacc
tggatctgcagctacctacctcgtcatgcagaacattacactgctgcctgtgaagatgtc
acagccatcgaggaggatctacttggacttccccctaatatcaataccctctgcgtatgt
atgacagatggcgaaaataatttgatgtctctgggttttttctctcagtttcaggatctg
gagtacctgtacattaagggctgttttactcaaatccttccatctgggaaaagccacctt
ccaaatctgcagtatttacatttggatggaatgggctctgggtgctgtgattgtcatact
gggcctcatacattcagagatctagtcaagctgagtcatttgaccatatggggttataga
ctatcagcaatggccccagatgttttccatggcatgactcaggtacaaagtttcatcatt
agtgaaccctgtgtagatgatttgtcagagatactatgcagaataatgaatataaagtca
cttataaagctaaatatagaagcactagagatacaatcgttaaaccaatccaactgctcc
atcttaaacaccaacgaaagcatgacacctgtttttaacaatctagcaatctctgacttc
tcatttggtgaaataacacatgtagaggaaggtgcactggcttggctccagaacctcaca
aggttaacaggggctttcagccaggaagtccttctgcgccttcccctgtctgggattcag
caaatccggtacttcagttgctctggtagcaatgaaatagatattgaaagtatctgtaat
gtggtgtttttgctttcaatcaagacattatatttatacaatggcaatacaagcagcctc
tccatgtccagtgttgaattgtgcattgggctagaatatatgtatttaggtggacctggc
tttttccattcaactctatatttggaatggcattttatttccagtctaaaaaaccttatt
caattaacaatagacggcctgaaagacaacagacttgatatttgctccttccaaaaacaa
ccaataaaatcgttaacaaaactgactttagagttgaacaatatacaaatgctttttgca
aaacaatttatctgttttggtaacctgctgtatttggatttagcagataattcaatttca
aacattgaagactttgctttcctgggattgacaaatctggaatccttagacatttcaaga
aataagattacgcagataaatacaaacacattttttggtttacaactgacaaaactgact
ttaaggttgaacaagctacacatgctttttgctaaacaatttagctgtcttgttaagctg
cagcatctggatttaacacagaatttaatttcaaacattgaagactttgctttccatgga
ttgacaaatctggtgtccttagatattacaaaaaataagataacgcagataaatgcaaac
acattttttggtttacatagtttgacatggttagacctcaggaacaatccacttattcac
aacattgaggcaatgtctttcacacacctcacgtctcttagacaagtgtttctcgggcaa
gtgcacaatccactaatagaacctgtgatcaagctgaatctgacacttatatttggtggc
attctgagtcagctgacccatctgtacattagttcagctatgaggccaatgcagctgatt
atcggcagtaacatcacatctaaacagaacctgagtctccagctcaaaggccagacggtg
tcatttcaggactgtgacagacctttctttcagtctgtaacccatcttcatgctgaagct
gaagaattcctttgtggatctgaattcatgggaaagtacttcacgtctgtggagacattt
gactacagatctaagctttcagctaaaagtgttgatttaacatcaattaatcagctgatt
cacctgaggaaactgactctacgacaggtggatcttttaatacagcgttctgccgacatc
atttttcacaacttgaccaaactggaggttttggaaatgtaccactgcaggatttattct
ttagaggggagtttaactaaagacttgaaatctttgaaaacattgtatttgcatatagag
aacatttataatgtcttctacagctttactgaacctctctctagccttaagtatttgata
cttcctcagatccagatcttttgcagttgtgacaatgcttggatcattacatgggccaaa
gtgtacaggcaggttgaagtgatcatgcttactccgtatactaatcccgttatgtatgct
ttggaggacttgatatgcttgtcggacaatggaatagacacacctaattttgtcaggtac
acagaagccaactgcacaacagaggttggctttgtgctctttgctgcgactggcctggga
gtcctgttcttcatgctggtggtgttggtccataacctggccggcccctacctcctcccc
ctctaccacatcacccttggctggctgtcggaggccatgcgatccaataccagggggcgc
taccactacgatgcgtttgtctcctatagcgggaaggacgaaagttgggtggtggaggag
ctgcttcccaatctggagcagaggggtcctcctttcctgcgcctctgtctgcacagcagg
gacttccagctggggaaggacattgtggagaacattacagacagcctctaccggagccgc
cacaccctctgcctagtcagccgccactacctgcgcagtaactggtgctccctggagatg
aagctggccacctccaggctgcaggtggagcaaagggatatcctcctccttgtcttcctg
gagaagatcccccctcgccagctgtctacccaccacaggctggctcgcctggtgaagacc
aggacctatctggactggccccaggaccctgatcagcaccaggcattctgggacagactg
tgggctaaactgtctgaagcgtga
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