Salmo salar (Atlantic salmon): 106602060
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Entry
106602060 CDS
T04363
Name
(RefSeq) zinc-activated ligand-gated ion channel-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
106602060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106602060
Ion channels [BR:
sasa04040
]
Ligand-gated channels
Serotonin (5-HT3)
106602060
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
106602060
NCBI-ProteinID:
XP_014049986
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All DBs
Position
ssa03:91967562..91978685
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AA seq
449 aa
AA seq
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MRPMDHSVLKYCLFSLFLLTVSASGTLSNAAITTIQTLSNTASASQLSNTATSSSVTTPS
CTTRRCLASMLIAKEALSQPQSPRCISIIRVPLIVYETLSVDTKNLRFESRLEVPLSWED
PDLSWDTSVYHHDMVVLPVSKIWTPELHVTNGVKTTMKHSNKDLLVHSNGTIEHMVIMNT
VVGCEVNLYNYPFASDFCAIALNVWAISGCGMFLNFGAVSTTSANRGDWLTEAVELNTKG
GRDDRNYLWVLLKMRSENPFLSLVLPSILIILADVGSFALPLGESKRIPFKVKLVLSFIM
FLNILKDLLPGGGQCSPIIRKHFCFCLVILVLSTLQSMVLTRLAKCGTLRPCSLSKSKDL
LLKDTDNEEESKSDIKASEEENTALQKVVKFLNKMAAQDQKKVRRHRFANKVDLICFCIY
LTVLIIYSFIILCFSFGSRCEIDHLEFWH
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagacccatggaccacagcgtgctgaaatattgtctcttctccctattcttgctaaca
gtatctgcatcaggcactctatccaacgcagccattactactatccaaacactatctaat
acagccagtgcatcccaactatccaacacagccacttcatccagtgtaaccacaccatcc
tgtacgacccgtcgatgtctggccagcatgctgattgcgaaagaagctctgagtcagcca
cagtctccacggtgcatctcaattatccgtgtgccgttaatagtgtatgaaactctgtct
gtcgacacaaaaaacctccgcttcgagagtcgtctggaagtcccgctgtcttgggaagac
cctgacttatcatgggacacatcagtctatcatcatgatatggtggtcctgcctgtcagc
aaaatctggactcctgaactccatgtgactaatggagtgaaaacaacgatgaagcacagc
aacaaggatttgctggtgcacagcaacgggactatagagcacatggtcatcatgaacact
gtggtgggctgtgaggtcaatctgtacaattaccccttcgcttcagatttctgtgccatc
gcccttaatgtgtgggcaattagtggatgtggcatgttcctgaactttggggctgtgagc
acaactagtgcaaaccgtggggactggctaaccgaggcagtggaactcaacactaaagga
ggcagagatgatcgcaactatctatgggtgttgctgaaaatgcggtccgaaaacccgttt
ctgtccctggtcctgcccagtatactaatcatcttggctgatgtgggcagcttcgccctg
ccgctgggagagagcaagcgcatccccttcaaggttaaactggttctcagcttcatcatg
ttcctcaacatcctcaaggaccttctgcccggaggaggccagtgcagccccatcatccgg
aagcacttctgtttctgtttggtcatcctggtgttgagcacgttgcagtctatggtgctc
acacgtctggctaagtgtggtactctccggccctgcagcctctccaagtccaaagacttg
ctgcttaaagacacagacaatgaagaggaatccaagtctgatattaaagcctctgaggaa
gagaatacagccctccagaaggtggtgaagtttctcaacaaaatggctgcacaagaccag
aaaaaagtgagacgccatcgctttgccaacaaagtggacttgatctgtttctgtatctat
ctcaccgtcctcattatttactcattcatcattttatgtttctcctttggttctcgatgt
gagatcgaccatttagaattctggcattaa
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