Salmo salar (Atlantic salmon): 106602196
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Entry
106602196 CDS
T04363
Name
(RefSeq) interferon regulatory factor 2-binding protein-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106602196
04121 Ubiquitin system [BR:
sasa04121
]
106602196
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
106602196
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Atypical E3
106602196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
106602196
NCBI-ProteinID:
XP_014050169
UniProt:
A0A1S3REF4
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All DBs
Position
ssa01:35798831..35801899
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AA seq
669 aa
AA seq
DB search
MSSAQVSSSRRQSCYLCDLPRMPWAMIWDFTEAVCRGCVNYEGADRIEFVIETARHLKRA
HGFQGGRSPGPPPPPTVKTQSAISAKETVQISHVDGPSKQQQSGMDRYSLSAERPRFDYS
SIGAHASRLPNGMSGPNGFPKPDDGPPELNRQSPNSRRSHGLAAVPGQMNVPPNLLPQTM
LNGPSSATTIAPHSLSSRPPPPSIVGPSLSMAAQSMSEQGKRPGSVSSTDQERDLKEKQR
NAEALAELSESLRNRNEDWGNKPKIVRDTLVTLSNSSPFDVRFKKDHSLVGRVFAFDAVS
KPGMDYELKIFVEYPNGSGNIFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGSG
DWRLLGDLLPESVRFFKEGLGVEMLPQPYIDASCPLLPTALVNIPRALPSTSAPRTGVRK
RKASPEPDSAESALKLSEQEQQRQQWMANQSEALKLTMASGSFGASHGGPPPLGPGHSVH
SSRATPPESAPQNGQSPMAALMSVADTLGNAHSPKDNNSVHSTTSTRHNSSSPVSPASVS
GQRRLASRNGELNLAGTPSQSNAHSGMDQVHSQNIPDSPMANNGPLCCTICHERLEDTHF
VQCPSVPNHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGD
VKVKKERDP
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcacaagtatcttcatcacggagacagtcatgttacctgtgcgatttaccc
cgtatgccatgggctatgatttgggattttacggaggcagtgtgcaggggttgtgtgaat
tatgaaggtgcggatcggatcgagtttgttatcgaaactgcacgccacctcaaacgagct
catggtttccaaggggggagatcccccggtccaccaccgccgcccacagtcaaaacacag
tcggcaatatcagccaaggagacggtgcaaatcagccatgtggacggaccctccaaacaa
caacagtcggggatggaccgctactctctgagtgcggaaagacctcgctttgactactcc
agtattggcgcccatgccagcagacttcccaatggaatgagcggtccaaatgggttcccc
aaaccggacgatggtcccccagaactgaaccgacagagcccgaactcccgtcggagccac
ggtctcgctgcggtcccaggacaaatgaacgttccccccaaccttctcccacagaccatg
ttgaatggaccctcctcggcaacaaccatagccccgcatagcctgtccagccgcccccct
cctccatccattgtgggaccctctttgtccatggccgctcagtccatgtcagaacaaggt
aaacgaccaggttctgtgtcaagcactgaccaagagagggatctgaaagagaaacagcgt
aacgcagaagctttggctgagctcagtgaaagtttaaggaacagaaacgaagactgggga
aacaaacccaaaatagtaagggacactttggttactctttcgaacagctccccgtttgat
gtgagatttaaaaaggatcattcactcgtgggtagggtgtttgctttcgatgcagtgtca
aagcctggaatggactatgaattgaaaatatttgtcgaatacccaaatggatctggtaat
atattttccagcgcatcaggggtggccaaacaaatgtatcaggactgcatgaaagacttt
ggcagagggctttcctcgggctttaaatatttggagtatgagaaaaagcatggttcgggg
gactggcgactcctgggtgatttgttgcccgaatccgtccgattctttaaagaggggctg
ggggttgaaatgttgcctcagccctacatcgatgccagctgcccattgctgcccactgct
ttggtcaacatccctcgtgccttgccatctacgagtgcaccgaggactggcgtgcgtaag
cgtaaagcctccccagaacctgactctgcagagagcgcgctgaaactatctgaacaggaa
caacagaggcagcagtggatggccaaccagagcgaggcgttaaaactgaccatggcatcc
ggatcattcggtgcctcacacgggggacctccgccgcttggccctggccattctgttcac
tcaagtcgcgccacaccccctgaatctgcgccccagaatggacagtctccaatggccgcg
ctcatgtctgtcgcggacacgttgggcaatgcgcactctccgaaggacaacaactctgtt
cactctacaacatccaccaggcataacagcagcagcccagtctccccagcctctgtttct
gggcagaggcgtttggcttcccgtaacggagagctcaatctggccgggactccgtctcag
tccaatgcgcattctggcatggatcaggtccactcgcaaaacattccagattctcccatg
gcaaacaacggacctctgtgttgtaccatttgccacgaacgtttagaggatacccatttc
gttcagtgtccgtcagttcccaaccataaattctgtttcccttgttctcgagagagcatc
aaagcgcagggagcaactggcgaggtgtattgtcctagcggagagaaatgccccctggta
ggttctaatgtgccttgggcgttcatgcaaggtgagatagcaacaatattagctggggac
gttaaggtaaaaaaggagcgagacccatag
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