Salmo salar (Atlantic salmon): 106602263
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Entry
106602263 CDS
T04363
Name
(RefSeq) polycystin-2-like
KO
K04986
polycystin 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106602263
04040 Ion channels [BR:
sasa04040
]
106602263
Cilium and associated proteins [BR:
sasa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106602263
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106602263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
RecX_HTH1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
106602263
NCBI-ProteinID:
XP_014050261
UniProt:
A0A1S3RDR9
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All DBs
Position
ssa04:complement(5520468..5528113)
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AA seq
748 aa
AA seq
DB search
MHQNLIQRNSYSIFHCVVTYGMVGSNMYYYTKVMSQLFLDTPLSPGDTATFRSLSTMSEF
WKFTEGPFLNGMYWEVWYNNKSLPENHSMIYYENLLLGVPRLRQVKVRNESCSVHEDLRD
KVQDCYNMYTPSNEDSAPFGPMNGTAWMYTEENSLNGSSYWGQVATYGGGGYYQDLARSR
DESAGLLRSLKQQLWLDRGTRAVFLDFSVYNGNINLFCIARLVVEFPATGGVVTSWQFQT
VRLIRYVSSWDYFVGVCEVAFCLFILYYVVEEALEIRIHRLRYFKSVWNCLDVLIVVLSV
SAIIINITRTSVVSNRLKDLLENHSAHPSFEPLAHLQVTFNNMAAVIVLFSWVKLFKFIN
FNKTMSQLSTTMSRCAKDLIGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQACIFTQFR
IILGDFEFSEIEEANPVLGPIYFITFVFFIFFILMNMFLAIINDTYSEVKADMSQQRSEM
EMTDLIKKGCNKALMKLRLKKTTVDDISDSLRQAGGKLNFGELRQDLKGKGHTDEEIEAI
FAKYDHGGDQELTEHEHQQMRDDLEKEREDLDLERSSLPRPTSGRSFPRSHDDSEEDDDE
DSGHSSRRRGSSSGGVPYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEAMERAKLKRR
DVLGKLLEGVLEDERQGRDMDVQREQMERLVREELERWESDDTVSQVSHPQPTTAIGPGA
QPRPRSARPSSSLSTDGVDAGGNGSGHV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaaatctcatccagagaaactcttacagtatctttcattgtgtagtgacctat
gggatggtgggctccaacatgtactactacaccaaggtgatgtcccagctcttcctggat
acaccactgtccccgggggacacagccacattcagaagcctctcaactatgagtgaattc
tggaagttcacagagggtcccttcctgaacgggatgtattgggaggtgtggtacaacaac
aagagtcttcctgagaaccacagtatgatctactatgagaacctgctactgggggtgccc
cgcctccgccaggtcaaagttcgcaacgaatcctgctccgtgcacgaggaccttagggac
aaagtgcaggactgctacaacatgtacacccctagcaacgaggacagcgccccctttggc
cccatgaacggaactgcgtggatgtacacagaggagaacagcctgaatgggagtagttac
tggggccaggtggctacctatggtggaggggggtactaccaggacctggcccgttccaga
gatgagtcagcaggcttgctacgctccctaaaacaacagctgtggctggacagaggaacc
agagccgtcttcctggacttctctgtctacaacggcaacatcaatctcttctgtatcgcc
agattggtggtggagttccccgctacaggaggcgtagtcacttcctggcagtttcagacg
gtgcgtctgattcgatacgtgtccagctgggactactttgtcggggtgtgtgaggtggcc
ttttgcctcttcatcctgtactacgtggtggaggaggccctggagatacgcatccaccgc
ctgcgctacttcaagagcgtgtggaactgcctggacgtcctcatcgttgtgttgagtgtt
tctgccataatcatcaacatcaccagaacgtccgtggtgagcaatcgtctcaaagacctt
ctggagaaccacagcgcccaccccagcttcgagcctctggcacacctccaggttacgttc
aacaacatggccgcagtcatcgtcctcttctcctgggtgaagctcttcaagttcatcaac
ttcaacaagaccatgagccagctgtccaccaccatgtctcgctgtgccaaggacctcatc
ggcttcgccatcatgttcttcatcatcttcctggcctacgctcagctggcctacctggtg
tttggcacccaggtcaacgacttcagtaccttccaagcctgcatttttacccagttccgc
atcatcctgggagactttgagttctcagagatagaggaggctaacccagtcctgggaccc
atctacttcatcaccttcgtcttcttcatcttcttcatcctcatgaatatgttcctggcc
atcatcaatgacacctactcggaggtgaaggcagacatgtcccagcagaggtctgagatg
gagatgacggacctcattaaaaagggctgtaacaaagccttgatgaagctgagactgaag
aagaccactgtggatgacatctcagatagtctgcgccaggccggtgggaaactcaacttc
ggcgagctccgccaggacctcaaaggaaagggccacacggatgaggagattgaggccatc
tttgccaagtatgaccacggtggggaccaggagctgactgagcacgaacaccagcagatg
agggatgacctggagaaggagagagaggacttggatctggagcgcagctcgttgcccaga
cccaccagtgggcggagcttcccccgtagccatgacgactcggaggaggatgacgacgag
gacagcggtcacagctcccgtcgccgcggcagcagctcaggaggcgtgccctacgaagag
tttcaagtgctggtgcgtcgtgttgaccggatggagcactccataggtagtatagtgtct
aagatcgatgcagtgattgtgaagctggaggccatggagagagctaagctcaagaggaga
gacgtgctgggaaaactgctggagggggtgctggaggatgagaggcagggtcgggacatg
gacgtccagagagagcagatggagcggctggtgagggaggagctagagcgctgggagtct
gacgacactgtctcacaggtcagccatccccagcccaccactgccattggtccaggagcc
caaccacgcccccgcagcgcccgcccctcctcctccctgtctactgacggggtggacgct
gggggtaatgggagtggccacgtgtaa
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