Salmo salar (Atlantic salmon): 106602278
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Entry
106602278 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106602278
03036 Chromosome and associated proteins [BR:
sasa03036
]
106602278
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106602278
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106602278
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106602278
UBL E3 ligases
106602278
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
106602278
Cilium and associated proteins [BR:
sasa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106602278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
zf-ANAPC11
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
106602278
NCBI-ProteinID:
XP_014050281
UniProt:
A0A1S3REI9
LinkDB
All DBs
Position
ssa04:6235580..6239808
Genome browser
AA seq
910 aa
AA seq
DB search
MAAAKMTLRLLKKSAPDKTSEVLSAEASPDSKCPICLDRFNNMSYLDLCLHKFCFRCIHE
WSKNKAECPLCKQPFNSIYHSIQSEKDFKKYDLRPTENGSFGSFAGERFRYRTTLTGARR
QDQRRTSPPPDNGVMFEALTGASPPPRQDRGLRRMMARLAARRQAESEGRTVRSLREQEM
IKFRRALYRRGVRVRSVRDGGRSRDISAEFFQRNPACLHRLLPWLKRELVVLYGAHGSLV
NIVQHIIMSRITRYDMEDRAIQEELQPFLQARTDHFLHEFVNFARAPFNMEAYDQHATYD
CPAPSSDEGSSSNSSVIAISEDEEGGDSVELDPPGDPVSGVALSQSTWDDETPGPSYSTT
EPTRALLLSIRVSDSESSLGEECGAVSQPKAPRLTAGSARVKTDKDGPACTSSGDEDCII
VGFVKPLAERTPELVKLSSDSEESVLEESKDEVPRLLQHIRFTSLSPASSQGQCPGRAEG
MEREQDVSCSKERRNTSPSIRRETSSKSASKNRGQTEKDGRRCQSRDRSRERPRSRSRDR
RRRSRSADRSRSTKSPAISINSDSTLSRGRRQSRSQSRDRSHTKGEKKSDNKDGSRSGRS
HDSSSHSYHWHYYSRESEKDSSATLYTERRSYYSSSHRNIDCRSPYRSQSPDSHRRDKRR
SRSRSSTCSPSGAHRKSRHEKPSGKRKYKSRHLEEPDPKDKSSNALDEPPSSTTSSCMKD
KKKSKEKRHRKSKEKSGGKRSRSLSVEIIYEGSSSEQTRKHQKKKRKKHKKKGKRHKSKE
RTGSGKHSPTVITIDSDSDQHTAAGANDANHTCPVSSSTSNYVLVPSTTTTTGNPADSGL
LESMLQHWEQQIPPVGLDSGALEVKPPLTAAATTDTPTHSEGVLSQSASADEVNCHSPSN
DNTSHSLEES
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaaagatgaccttacggctactcaagaagagtgccccggacaagacctca
gaggttttgtctgccgaggcgtctccagactctaagtgccccatctgtctggaccgattc
aacaacatgtcctacctcgatctctgcttgcacaagttctgcttccgctgcatccacgag
tggtccaagaacaaagccgagtgcccgctatgcaagcagccattcaactctatctatcac
agtatacaatcagagaaggacttcaagaagtatgacctgcggcccacggagaacggttcc
tttgggagtttcgcaggggaacggttccgctaccgcaccacgctgacgggggcgcgtcgg
caggaccagagaaggacatcccctccccccgacaacggggtcatgttcgaggccctaacg
ggggcttccccccctcctcggcaggaccgaggcctccgtcgcatgatggcgcgcctggcg
gccagaaggcaggcagaaagcgagggccggaccgtgcgcagcctccgtgagcaggagatg
atcaagttcagacgggcgctctaccggcgaggggtgcgagtgcggagcgtgcgggacggc
ggccgttcccgggacatctcggcggagttcttccagaggaaccctgcctgcctgcaccgc
ctgttgccctggctgaagagagagctggtggtgctgtacggtgctcacggctccctggtc
aacattgtgcagcacatcatcatgtcccgcatcacccgctatgacatggaggaccgggcc
atccaggaggagctgcagcccttcctccaggcccgcaccgatcacttcctgcacgagttt
gtcaacttcgcccgagcacccttcaacatggaagcctacgaccagcatgccacctacgac
tgccctgcgccgtcctcggacgagggcagcagctccaactcctcagtgatcgccatctcc
gaggatgaggaggggggcgattctgtggagctggaccccccgggggaccccgtgtccggg
gttgccctgagccagtcaacatgggacgacgagacgcccggaccttcgtactccacaaca
gaacccaccagggccctgctgctatcaatcagagtctcagactcagagagcagtttgggg
gaggagtgcggagcagtgtcacagccaaaggcccctcgcctgactgcaggctctgctcgg
gtgaaaaccgacaaggatggaccggcgtgtacctcctctggcgatgaggattgcatcatc
gtgggctttgtaaagcccctagctgaaaggactccagagctggtcaaactgtcctctgac
tcagaggagtctgttctggaggagagcaaagacgaagtgcccaggctgcttcaacacatc
cgcttcaccagccttagccctgcctcctctcaaggccaatgtcctgggagggcagagggg
atggaaagggagcaagatgtatcgtgctccaaggagagacgtaacacctcaccctcaatt
agacgtgagacatccagtaagtcagcaagcaaaaacagaggacaaactgagaaagatggc
aggagatgtcaaagtcgcgatagatctagagagaggccacggtcgagaagcagagaccgg
aggaggaggtccaggagtgccgaccgcagccgctcgaccaagagcccggccatctccatc
aacagcgacagcactctgtccagaggcaggaggcagtcgcgctcccaaagccgcgaccgc
tcccacactaaaggagagaagaagagtgacaataaagatggcagccgatcaggccgcagc
cacgactcatcgtcgcactcctatcactggcactattacagccgggagagtgagaaggac
agcagcgccacactctacacagagaggaggtcctactactccagctcacacaggaacatc
gattgcaggtccccataccggagccagagtcctgattcccaccggcgggataagaggcgc
tccagaagtcgttccagcacgtgttcgccgtccggtgctcacaggaagtctcgtcacgag
aagcccagcgggaagagaaagtacaaatcgagacacctggaggaacctgaccccaaagac
aagtcttccaatgcccttgacgagcctccctcctccaccacctcgtcctgtatgaaagac
aagaagaagagcaaagagaagcgtcacaggaagtccaaggagaagtcgggggggaaaagg
agcaggagcctcagcgtggagatcatctatgagggcagctcctcagagcaaaccaggaag
caccagaagaagaagaggaagaagcacaagaagaagggcaagaggcacaagagcaaagag
cgcacagggtccgggaaacactcgcccactgtcatcaccatagacagcgacagtgaccaa
catactgccgcaggcgctaacgatgctaaccacacctgcccggtaagcagcagcactagc
aactacgtgctagtacctagcacaaccaccaccacaggcaaccctgcagactctggcctg
ctggagtccatgttacaacactgggaacagcagattccacctgtgggtctggacagtgga
gcgttggaggtcaagcctcctctaactgctgctgctactactgacacacctacacatagt
gagggggttctgtcccaatctgcctctgcggatgaggtgaactgtcatagcccttcaaat
gacaacacaagtcattctttggaagaatcataa
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