Salmo salar (Atlantic salmon): 106602324
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Entry
106602324 CDS
T04363
Name
(RefSeq) polycystin-2-like
KO
K04986
polycystin 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106602324
04040 Ion channels [BR:
sasa04040
]
106602324
Cilium and associated proteins [BR:
sasa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106602324
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106602324
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
RecX_HTH1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
106602324
NCBI-ProteinID:
XP_014050359
UniProt:
A0A1S3REZ8
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All DBs
Position
ssa04:complement(7941686..7959259)
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AA seq
918 aa
AA seq
DB search
MSSTRVRSQQPQQNQAGRSATGAAGASLPHRLDTSEGIEMENIHHQDLGLGGAIGTPSPP
SRQAWSRDNPGFEPEDEMMGADWPPASPGRRSVSTGSSSSCSSGLGSYTAGGSSTRIHRG
LYPTPTVDALQQDRHDIKSCGKRILEKIRILWGTQLMEDSDSSRERYLRNVLREMVTYVI
FLITLCILTYGMVGSNMYYYTKVMSQLFLDTPLSPGDTATFRSLSTMSEFWKFTEGPFLN
GMYWEVWYNNNSLPENHSMIYYENLLLGVPRLRQVKVRNESCSVHEDLRDEVQDCYNMYT
PSNEDSAPFGPMNGTAWMYTEENSLNGSSYWGQVATYGGGGYYQDLARSRDESAGLLRSL
KHQLWLDRGTRAVFLDFSVYNGNINLFCIARLVVEFPATGGVVTSWQFQTVRLIRYVSSW
DYFVGVCEVAFCLFILYYVVEEALEIRIHRLRYFKSVWNCLDVLIVVLSVSAIIINITRT
SVVNNRLKDLLENHSAHPSFEPLAHLQVTFNNMAAVIVLFSWVKLFKFINFNKTMSQLST
TMSRCAKDLIGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQACIFTQFRIILGDFEFSE
IEEANPVLGPIYFITFVFFIFFILMNMFLAIINDTYSEVKADMSQQRSEMEMTDLIKKGC
NKALMKLRLKKTTVDDISDSLRQAGGKLNFGELRQDLKGKGHTDEEIEAIFAKYDHGGDQ
ELTEHEHQQMRDDLEKEREDLDLERSSLPRPTSGRSFPRSHDDSEEDDDEDSGHSSRRRG
SSSGGVPYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEAMERAKLKRRDVLGKLLEGV
LEDERQGRDMDVQREQMERLVREELERWESDDTVSQVSHHQPTTAIGPGAQPRPRSARPS
SSLSTDGVDAGGNGSGHV
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgactcgagtgagatcacaacaaccgcagcagaatcaggctggcaggtccgcc
acgggcgcagcgggtgcgtccctgccgcacagattggacacaagcgaggggattgagatg
gagaacatacatcaccaggacttggggctcgggggcgccataggcacaccatcacccccc
tcaagacaagcctggagtcgggacaacccggggttcgaaccggaggatgagatgatgggg
gccgattggcctccggctagcccagggagaagatcagtgtccacaggctccagcagtagc
tgcagcagcgggttgggaagttataccgccggagggagcagcacccgcatccaccgtgga
ttatacccgaccccgacagtggatgccctgcagcaagacagacatgacatcaaaagctgt
gggaagaggatactggagaaaataagaattttgtggggtactcagctgatggaggatagt
gacagcagcagagagaggtacctgaggaacgtcctgagagaaatggtcacctacgtcatc
ttcctcatcacactgtgtatcttgacctatgggatggtgggctccaacatgtactactac
accaaggtgatgtcccagctcttcctggatacaccactgtccccgggggacacagccaca
ttcagaagcctctcaactatgagtgaattctggaagttcacagagggtcccttcctgaac
gggatgtattgggaggtgtggtacaacaacaatagtctccctgagaaccacagtatgatc
tactatgagaacctgctactgggggtgccccgcctccgccaggtcaaagttcgcaacgaa
tcctgctccgtgcacgaggaccttagggacgaggtgcaggactgctacaacatgtacacc
cctagcaacgaggacagcgccccctttggccccatgaacggaactgcgtggatgtacaca
gaggagaacagcctgaatgggagtagttactggggccaggtggctacctacggtggaggg
gggtactaccaggacctggcccgttccagagatgagtcagccggcttgctacgctcccta
aaacatcagctgtggctggacagaggaaccagagccgtcttcctggacttctctgtctac
aacggcaacatcaatctcttctgtatcgccagattggtggtggagttccccgctacagga
ggcgtagtcacttcctggcagtttcagacggtgcgtctgattcgctacgtgtccagctgg
gactactttgtcggggtgtgtgaggtggccttttgcctcttcatcctgtactacgtggtg
gaggaggccctggagatacgcatccaccgcctgcgctacttcaagagcgtgtggaactgc
ctggatgtcctcatcgttgtgttgagtgtttctgccataatcatcaacatcaccagaacg
tccgtggtgaacaatcgtctcaaagaccttctggagaaccacagcgcccaccccagcttc
gagcctctggcacacctccaggttacgttcaacaacatggccgcagtcatcgtcctcttc
tcctgggtgaagctcttcaagttcatcaacttcaacaagaccatgagccagctgtccacc
accatgtctcgctgtgccaaggacctcatcggcttcgccatcatgttcttcatcatcttc
ctggcctacgctcagctggcctacctggtgtttggcacccaggtcaacgacttcagtacc
ttccaagcctgcatttttacccagttccgcatcatcctgggagactttgagttctcagag
atagaggaggctaacccagtcctgggacccatctacttcatcaccttcgtcttcttcatc
ttcttcatcctcatgaatatgttcctggccatcatcaatgacacctactcagaggtgaag
gcagacatgtcccagcagaggtctgagatggagatgacggacctcattaaaaagggctgt
aacaaagccttgatgaagctgagactgaagaagaccactgtggatgacatctcagatagt
ctgcgccaggccggtgggaaactcaacttcggcgagctccgccaggacctcaaaggaaag
ggccacacggatgaggagattgaggccatctttgccaagtatgaccacggtggggaccag
gagctgactgagcacgaacaccagcagatgagggatgacctggagaaggagagagaggac
ttggatctggagcgcagctcgttgcccagacctaccagtgggcggagcttcccccgtagc
catgacgactcggaggaggatgacgacgaggacagcggtcacagctcccgtcgccgcggc
agcagctcaggaggcgtgccctacgaagagtttcaagtgctggtgcgtcgtgttgaccgg
atggagcactccataggtagtatagtgtctaagatcgatgcagtgattgtgaagctggag
gccatggagagagctaagctcaagaggagagacgtgctgggaaaactgctggagggggtg
ctggaggatgagaggcagggtcgggacatggacgtccagagagagcagatggagcggctg
gtgagggaggagctagagcgctgggagtctgacgacactgtctcacaggtcagccatcac
cagcccaccactgccattggtccaggagcccaaccacgcccccgcagcgcccgcccctcc
tcctccctgtctactgacggggtggacgctgggggtaatgggagtggccacgtgtaa
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