Salmo salar (Atlantic salmon): 106602856
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Entry
106602856 CDS
T04363
Name
(RefSeq) rho guanine nucleotide exchange factor 15-like
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106602856
Membrane trafficking [BR:
sasa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106602856
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
PH
SH3_9
RepB_C
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
106602856
NCBI-ProteinID:
XP_014051266
UniProt:
A0A1S3RGC1
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All DBs
Position
ssa04:complement(28238715..28273517)
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AA seq
1126 aa
AA seq
DB search
MIVSRLRPRSVVPPKPSNLKPLGPNIPNHFQTRNQNRPNPNQNQPPSGERSQERKQHQPP
EGKVKRIVRKFSSQENEVMGQAGLETRTGVKAGAETVTGEKQGDGGVVGWTRTRTEAGQQ
ADSNRGQTRARQADYDAIIMSPSVELSLIPPPVPLRKPRSGPYTQPTAQPTAQSDAVPLG
QETDNHSCTILTPGHGRGNRSAPDGSEVDEAPVCVTIESRQTTGSAATPSGHHGNMTQCQ
CICHLRRTGMKLVWVPLEEEEDNYVEVIGDEEKDKRGNEHQKRVAKEGKEEEEDDYIEVT
GDEEKEKRGNEDQKRERKEVNEEMLGSFRADERGGKSQTGCQTETAAVFSEHREVRVHEV
SENNSQRSFSSKHNTSSNAESSLALMICSQHSSYQLSTQQHSSNTKHSSHQHSSHTKQTR
PPQNKTETYDEVTYEAMPMSDREEPHPPPPPPRPPHLMKPPLTHKTQHPSPPKDHLQGTL
LQSMSTPSLSGLLTSISKSDIQKSAPSPQTPPSISHGNPHQPILRPLPPLPVLHDLRFLP
CPIMPRPPQLRLQIPMKPLPPNPEPSGPSCPSRHSSTDADVRDDWVTVDEEDVEEPQEQA
DMPRRISSDWGPLRLDEPLYQIYQAKSIKEAIQLQSISRSASRATVDLHVRLRGGGSLGA
PKGQSSRARNGPAEVTLWQELPVVRDSGILERLSPEELQRQESMFEVLTSEASYLHSLNV
LTDHFLMCRDLDDTLVIHDKKTLFSNILHVYDVSQRFLKDLLNRIDENILITDVCDIIHQ
YALNDFSVYIDYIRNQGYQERAYSSLVQTNNPFALVMRRLEESPLCRRLPFSSFLLLPFQ
RITRIKILVQNILKRTKEGTREENTASRALTSVSEIIKESNTQVGQMKQMEELIQVNNTL
EFNKLKAVPIVSKARFLEKRGELYELSKGASLFSARLKLTPIYLFLFNDLLIITCKKSSE
RYMVTDHAHRSLVQVLPTGFGAGAEDPGPKLEHSFCLLLLENHRGLACEHLLKAPSESDM
HRWMAAFPSLNDPNRKKEEVVYEDWDCPQVQCVEQYVAQQADELTMEPADIINVLRKTHE
GWYKGMRLSDGEKGWFPSKSVVEITNEHRRRRNLREQYRIAKVTKN
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgtcaagacttcgacccagatccgtcgttcccccaaagccttctaacctcaaa
cccttggggccaaacatcccaaaccatttccagaccagaaaccagaacagaccaaaccca
aaccagaaccaacccccatcaggggagaggagccaggagaggaaacaacatcaaccaccg
gaggggaaggtgaagaggattgtgcgtaagttcagcagccaggagaatgaggtgatgggg
caggcaggactagagacaagaacaggggtaaaggcaggggcagagacagtgactggggaa
aagcagggagacggtggggtggtggggtggacaaggacaaggacagaggcaggacaacag
gcagacagtaacagaggacagacaagggcccggcaggccgactatgatgctataataatg
agcccttctgtggaactcagcctcataccacctccagtaccattgagaaagccacgttct
ggcccttacacacaacctacagcacaacccacagcacagagtgatgccgtgcccctgggg
caggagacagacaaccattcgtgcaccattctcacacctggacatggacgaggaaacaga
tcagctcccgatggtagtgaggtggatgaagcgcctgtgtgtgttaccattgagagcaga
caaaccacaggctcggcagccacccctagtggtcaccatggcaacatgacacagtgccag
tgcatctgtcacctgaggagaactggcatgaagttagtctgggttcctctggaggaagag
gaagataactatgtagaggtgataggggatgaagaaaaagacaaacgagggaatgagcac
cagaagagagtggctaaggaggggaaggaagaggaggaagatgactacatagaagtgaca
ggggatgaagagaaagaaaaacgagggaatgaggaccagaagagagagaggaaggaggtg
aatgaagagatgttgggatctttcagagcagatgagcgaggggggaaaagtcagacaggg
tgccagacagagacagctgctgtgttcagtgagcacagagaggtcagagttcacgaggtc
agcgagaataacagccagagatccttctcttcaaaacataacacatcatccaacgcagaa
tcttccctggccctgatgatctgctcacagcacagctcatatcagcttagcacacaacag
cacagctcaaacaccaagcacagctcacaccagcacagctcacacaccaagcagactaga
ccccctcaaaacaaaactgagacatatgatgaggttacatatgaggccatgcccatgtct
gacagagaagaaccacatccacccccacccccaccccgacccccacacctgatgaaacct
ccactgacgcacaagacgcagcatccctcccctccgaaggatcatctccagggaaccctt
ctccagagcatgtccactccctctctctctggcctactaacctcaatttcaaagtcagac
atccagaagagtgccccttcccctcagactcctccctccatctcccacggcaacccccat
cagccaatcctgcgacctctgcctccacttcctgttttacatgatctccgctttctcccc
tgccccatcatgccccgccctcctcaactcagacttcagattccaatgaaacctcttcca
cctaaccctgagcccagtggccctagctgtcccagccgacactcatccacagatgctgat
gttagggatgactgggtgactgtagacgaggaggacgtagaggagccacaggaacaggca
gatatgcccaggaggatctcctcagactggggacctttgaggctggacgaacctctgtac
cagatctaccaggctaagtccatcaaggaggcaatccagctccagagcatcagccggagt
gccagcagggccaccgtggacctccatgtgaggctgaggggcggtgggtccttaggggcc
cctaagggtcagtcctccagggccaggaatggccccgcagaggtcacactgtggcaggag
ctacctgtggtcagagacagtgggatcctggagagactcagtccagaggagctgcagaga
caggagagcatgtttgaagtattgacatcagaagcctcgtacctccactcactgaacgtt
ctcactgatcacttcctaatgtgtcgggaccttgacgacacactggtgatccatgacaag
aagaccctcttctccaacatactccatgtgtatgatgtcagccagaggttcttgaaggat
cttctgaataggatcgatgaaaacattctgataactgatgtgtgtgacatcatccaccaa
tacgccctgaacgacttctcagtctacattgattacatccgtaaccagggttaccaggag
agggcctacagctccctcgtgcagaccaacaacccgtttgcattggtgatgcggaggctg
gaggagtctcccctatgtcgtcgtcttcccttctcctcctttctgctccttcctttccag
aggatcacacgcatcaagatccttgtacagaacatcctgaagaggactaaagagggcact
agggaggagaacactgcctctagagccctgacctcagtgtctgagatcatcaaggagtcc
aacacccaggtgggccagatgaagcagatggaagaactcatacaagtcaataacacactg
gagttcaacaaactcaaggctgttcccattgtctcgaaggctcgcttcctggagaagaga
ggagagctgtatgagctatccaagggggcctccctcttcagtgctcgtctcaaactcacc
cccatctacctcttcctcttcaatgacctactcatcatcacatgcaaaaagagctcagag
cgctatatggtgacagaccacgcccaccgctccctggtgcaggtcctgcccacagggttt
ggggctggagcggaggacccagggcccaagttggagcactccttctgtctgctactgctg
gagaaccaccgaggactggcctgtgaacacctgctgaaagccccctcagagtcagatatg
caccggtggatggcagcattcccttccctaaatgacccaaacagaaagaaggaagaggtg
gtttatgaggactgggattgtccccaggtgcagtgtgtggaacaatacgttgcccagcag
gctgatgagctcaccatggagcctgctgacatcatcaacgtgctacgcaagacccatgag
ggttggtacaaggggatgcgtctgtctgacggagagaagggttggttccctagcaaaagc
gttgtggagataaccaatgagcatcggaggagacggaaccttcgggagcagtaccgcatc
gctaaagtcacaaagaactaa
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