Salmo salar (Atlantic salmon): 106602895
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Entry
106602895 CDS
T04363
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106602895
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106602895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
HTH_24
Motif
Other DBs
NCBI-GeneID:
106602895
NCBI-ProteinID:
XP_014051352
UniProt:
A0A1S3RHM6
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All DBs
Position
ssa04:complement(30916145..30919387)
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AA seq
322 aa
AA seq
DB search
MVNMYNIIEHQLKSSVPSHHPGTGMPPANGVGGHEGGHTGSKLPTIQPDPMDKVKRPMNA
FMVWSRGERRKMAQENPKMHNSEISKRLGVAWKSLTDAEKRPFIDEAKRLRAVHMKDYPD
YKYKPRRKTKPMPKNNTLAAQYQMSAGNHLLSASAAQGQVGNPRMDAYGWGHTGGYTAAM
QSEALGYSQQLHRYDLSALQYQSSMAQAQAYMNGANAYSPMSYNSSPQQVSPVMSMVKQQ
SDSHSMSPSPTGPHSPLQQHHHQAHQQHQTQRGIQVQGDHLRDMISMYMPGGDASEAQRG
YSVSAANIQQHYLGGSAPLTHL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatatgtataacattatagagcaccaactcaagtcctctgtcccttcacatcat
cctggaacaggaatgccacctgcgaacggagtaggggggcacgagggcggccacacaggt
tccaaattaccgacaatccaacctgacccgatggacaaagtcaagcggcccatgaatgcc
ttcatggtctggtctcgcggtgagcgacggaaaatggctcaggaaaatcccaaaatgcac
aattctgagatatccaaacggctgggtgtcgcgtggaaatctctaacagacgccgagaaa
aggcccttcattgacgaggcaaagcgcctccgcgcggtgcacatgaaggattatccggac
tacaaatacaagccccgtcgtaaaaccaaaccgatgccgaagaacaatactctagctgcc
cagtatcagatgtcggcgggtaaccacctgctgagtgcgtccgcggctcagggacaagtt
ggaaaccccagaatggacgcatatggctggggccacacagggggctacactgcggcgatg
cagagcgaggcgctcggctacagccagcagcttcatcgctatgacctgtcagcacttcag
tatcagtccagcatggcccaggcccaagcctacatgaatggtgccaacgcatacagcccc
atgtcctacaacagcagcccccagcaggtcagcccagtgatgtccatggtgaagcagcag
tctgatagccacagcatgtccccctcccccaccgggccccacagccccctccagcagcac
caccaccaggcccaccagcagcaccagacccagcgtggtatccaggtccagggagaccat
ctcagggacatgatcagcatgtacatgcctgggggagatgcctcagaggcccagagaggg
tactccgtctctgcagcaaacatccagcagcattacctgggagggtcagctccactcacc
cacctttga
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