KEGG   Salmo salar (Atlantic salmon): 106602925
Entry
106602925         CDS       T04363                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106602925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sasa03041]
    106602925
Spliceosome [BR:sasa03041]
 Complex B
  Other components
   Prp19-related factors
    106602925
 Complex C
    106602925
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus zf-CCCH_2 RRM_occluded Nup35_RRM_2 zf-CCCH zf-CCCH_4 RRM_YTH1 zf-CCCH_10 RRM_3 zf-CCCH_12 zf-CCCH_PARP12 zf-C2H2_16
Other DBs
NCBI-GeneID: 106602925
NCBI-ProteinID: XP_014051414
UniProt: A0A1S3RI18
LinkDB
Position
ssa04:complement(32162365..32168566)
AA seq 423 aa
MATSLGANIYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSIKDDVPKSDVNKEYYTQN
MEREIGNSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDTPEDKSITTLYVGGLG
DSITDSELRNHFYQFGEIRTTTIVQRQQCAFIQFATRQAAELAAEKSFNKLIIKGRRLNV
KWGRSQGARGKEGREREGVTEMGMKLEPVPGLPGALPLPPVDEDAPTNYFNLGPNSAPPV
MNISLPPPPGVAMPPPGFGPPMFHSMDPMAIPHPMGMRPPGHVHYPSQDPQRMGAHASRH
GGS
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggcgacatctttaggagctaatatttacaacagacaaaattgggaagacgcggatttt
cctattctctgccagacatgtcttggagagaatccttatattcgaatgaccaaggagaaa
tatggcaaggagtgtaagatatgtgccaggcccttcacagtgttccgatggtgtcctggg
acccgcatgcgattcaaaaagacagaggtgtgccagacgtgcagtaagatgaagaatgtc
tgtcagacgtgcctgctggatctagagtatggcttgccaatacaggtccgagacactggg
ctgtcaatcaaggacgacgtgccaaaatccgacgtgaacaaggaatactacactcagaac
atggaaagagagatagggaactctgatggtacacggccagtgggtctcctgggtaaggcc
cccagctctagtgacatgctgttgaagctagcccgcaccacgccttactacaagaggaac
agaccacacatctgctccttctgggtgaagggagaatgtaagagaggagaagagtgtccc
tacaggcatgagaagccaactgatcctgacgatcccctggcagaccagaacattaaggac
cgttactatggtatcaacgaccctgtggctgacaagctgctgaagagggcctccaccatg
cctagactggatacgccagaggacaagtccatcactacactgtatgtgggggggctcgga
gactccatcactgattcagagctcaggaaccatttctaccagtttggggagatccggacc
accaccatcgttcagaggcagcagtgtgccttcatccagtttgccacccgtcaggctgca
gagttggctgctgagaaatccttcaacaagctcattatcaaaggtcgcagactcaacgtc
aagtggggcaggtcccagggagcgcgggggaaggagggaagggagagggaaggggtgaca
gagatggggatgaagctggagccggtacctggactgcctggagcgctacctctgccacct
gtggatgaagatgcccctaccaactatttcaacctgggccccaactcagcccctcctgtc
atgaacatcagtctacccccaccccccggcgtggctatgccccctccaggctttggccca
cctatgttccactccatggaccccatggcgataccccatcccatggggatgaggcctcct
ggccatgtccactacccctcccaggatccacagcgcatgggtgcacacgccagtcgtcac
ggaggctcctag

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