Salmo salar (Atlantic salmon): 106602985
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Entry
106602985 CDS
T04363
Symbol
SFRS5
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106602985 (SFRS5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106602985 (SFRS5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106602985 (SFRS5)
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
SR proteins
106602985 (SFRS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
106602985
NCBI-ProteinID:
XP_014051581
UniProt:
C0HAB7
LinkDB
All DBs
Position
ssa01:4551861..4557504
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AA seq
315 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREVNLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGGGGGGGGGRFSPRFSSYRQGSGGHGGGGGGSSRY
GPPVRTEHRIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNKNEGVVEFASHSDMKNA
IDKLDGTDLNGRKLKLSEDRKSRHSRSRSRGSRSYSRSRSRSPRSKSRSRSRNRSRSPRS
RSASRTPEKKPSSGGGGRAVHRSTSRSPSRSRSPAPRSRTPPPRSRSRTPPPSSPAPARK
QSPSRSRSPSAESQH
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgtgtgtttatcggtcgtttgagcccccacgcccgtgagagggacgtg
gagaaattcttcaagggatatggacggatccgagaagtgaatttgaagaacggattcggc
tttgtggagtttgacgaccacagagatgcggatgatgccgtatacgagctgaatggcaag
gaactctgtagtgaaagggtgacgatagagcatgcccgctccagaagagggaggggtggt
ggaccagggatggggggtggtggtggtggtggtggaggaggacgcttctcacctcgtttc
agcagctaccgccagggctctggtggtcatggtggtggtggtggtggttccagtaggtat
ggtccgccggtgcgaacggagcacagaatcattgtggagaacctgtcatcacggatcagt
tggcaggacctgaaagacctgatgaggaaagccggagaagtcacctttgtggatgcacac
agaaccaacaagaacgaaggggtggtggagttcgcatcacacagtgatatgaagaatgcc
attgataagctggacggaacagacttgaatggacgcaagttgaaactgtctgaggatcgc
aagagccgccacagtaggagtcgttcccgtggctctcgtagctactcccggtcccgtagc
cgttccccccgctccaagtcccgtagcaggagtcgtaaccgctccaggagcccccgatct
cgctcggccagccgtaccccggagaagaagccttcatctggaggagggggcagggctgta
catcgttccacctcacggtccccgtcccggtccagatcccctgcccctcgctcccgtacc
cctcccccacgctcccgttctcgcacgcctcctcccagttcccctgccccggcccggaag
cagtctccgtcccggtctcgctccccctcggctgagagccagcactga
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