Salmo salar (Atlantic salmon): 106603047
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Entry
106603047 CDS
T04363
Name
(RefSeq) beta-1,4-galactosyltransferase 4-like
KO
K07969
beta-1,4-galactosyltransferase 4 [EC:
2.4.1.90
2.4.1.275
2.4.1.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00533
Glycosaminoglycan biosynthesis - keratan sulfate
sasa00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sasa01100
Metabolic pathways
Module
sasa_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
106603047
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
106603047
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
106603047
Enzymes [BR:
sasa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.90 N-acetyllactosamine synthase
106603047
2.4.1.275 neolactotriaosylceramide beta-1,4-galactosyltransferase
106603047
Glycosyltransferases [BR:
sasa01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
106603047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
106603047
NCBI-ProteinID:
XP_014051653
UniProt:
A0A1S3RH87
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All DBs
Position
ssa04:complement(34860433..34868433)
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AA seq
355 aa
AA seq
DB search
MGVCPAVSRYFRRWKYMILLLLSVSVLAWLATFAGETVKSIQDTHRSAQTLEDNAEVLRG
GMQYSWKTVTQVFSNPLPDTPPPKESCPEKSPLLHGALKLTFEDSLTLKEVESENSGVAE
GQYQPPDCLAQQSVAILIPHRNREKHLLYLLHHLHPFLQRQQLRYGIYVIHQAGEVTFNR
AKLLNVGYLEALKDYDWDCFVFHDVDLVPENDYNLYKCDQQPKHLVVGRNATGYKLRYKG
YFGGVTAMTKDQFHKVNGFSNTYWGWGGEDDDLRIRVELQKMKIIRPPPLIARYTMVFHK
RDSGNEINKDRMLLLGRTPQVWRTDGLNTCSYSTLSVERPPLYINVTVDIGKPLH
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgggagtctgtcctgctgtgtccaggtacttccggaggtggaagtatatgatactgttg
ctgctgtcagtctccgttttggcttggctcgccacttttgccggcgaaaccgtgaaatca
attcaggatacccataggtcagcacagacacttgaggataacgctgaggtcctgaggggg
ggcatgcaatactcatggaaaacagtgacgcaagtcttctccaatcctctccctgacacc
ccaccaccaaaagaaagctgtcctgagaaatcaccactgcttcacggagccctgaagctg
acattcgaggactctctaacgctgaaggaggtggagagtgagaacagcggagtggctgag
ggccaataccagcctccagactgcctcgcccagcagagtgtggccatcctcatccctcac
cgtaaccgggagaaacacctcctctacctcctgcatcacctgcaccctttccttcagagg
cagcagctgcgctacggcatctatgtcatccaccaggctggagaggtgacgtttaatcgt
gccaagctacttaatgtggggtacttggaggcactcaaggactacgattgggattgcttc
gtttttcacgatgtggatctggttccagagaacgactacaacctatacaagtgtgaccaa
cagcccaaacacttagtggtcggtaggaacgccacaggatacaaattgcgatacaaaggg
tactttggaggggtgacggccatgacgaaggaccagtttcacaaagtgaacggcttttca
aacacttactggggatggggtggggaggatgatgatcttcgcatcagggtggagctccag
aaaatgaagattatacggccaccccctcttatagcacgctataccatggtatttcataaa
agagatagcggcaacgaaattaataaagaccggatgctcttgctaggacggacacctcaa
gtctggagaacggatggccttaacacctgctcctacagtactctctcagttgagaggcca
cctctgtacattaatgtcacagtggacattggcaaaccactgcactga
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