Salmo salar (Atlantic salmon): 106603092
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Entry
106603092 CDS
T04363
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106603092
04121 Ubiquitin system [BR:
sasa04121
]
106603092
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
106603092
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
106603092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF7477
Motif
Other DBs
NCBI-GeneID:
106603092
NCBI-ProteinID:
XP_014051765
UniProt:
A0A1S3RHH6
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Position
ssa04:35812511..35816706
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AA seq
891 aa
AA seq
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MDFRGYTLSSSLAPNLRRRGERGATGLVLDRRKSTVWNYYIQLNEMYVECNICKRQLSFH
NSTTTMREHLVRKHNIRDNAPPVLDNTAVAGAPIPATSLQPMAQPGFPCNISTTSATANT
CMFQTDLHIVVKEEQQDADLSPEQGMAKRARITCAPPLDVGSGANANPVTSQDLEPSNSN
TGLLYSENNNFGDTNRSGTAVKESNGKRTGVLTDLILEMVYRDLQPLSVVEERGFRLLLS
CLEPQYPVPSPSQLGSLLWHHYDVLKRHLQQYLQSGLAPRCITLCTEYWQSVAGCAVGAG
GRLFFTVSAHFVDKDWRLARCVLQTCPMPDIREKICERGFIQFGDTLKAVLSEFHLPQSS
VFCVVHDTPRISEARGTENMRVPKEKVNRTAGPRQSPQDLPEGWVALHCAGEALKLCIQD
GLWMEPVRQALAEARRIISHFQHDAPAAAALIHKAEAANKAGACLVLDDPGRWATAIDMC
ESLLELKWVVSSVLEEQKAAPNLADHQWRLLQELVPVLKTVRIAASFLSEDINLSISALM
PCLHGVSRVLEQHISETSCPVARGVMETVRSGMERQWRLGEEEALLDSPAVLSSFLDPRF
KELRFLSPHARSRLHDKVKELLSAQAQIEVEEMSRECDKGGEDEDGEEGREKEVRNRGLD
HSQSTIAPLDSPVSCESNEEGDIIVLQQQLKGLSQTAPSQVSGEGLGEGSRCSAGNGPRR
VAGLSSLLKGDLQPPAYRQVSHVPKSMYDILLGEDPTERMPEIHQQLENYIAEPLCKRSL
SPLHWWRSKEHRFPAVARLARTFLAIPATAVPADRAFAPRETTVAQRRAILGPQHLDHIL
FLHQNSDYVEKLMGGSTGHEERGGDRNGAKQTLYQSLVSYESKAWVGGEKL
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggatttccgagggtacaccctgtccagcagtctggccccaaatttgaggagaaggggg
gaacggggagcaacaggactggttctggacaggcgcaagtcaaccgtttggaattactac
atccagcttaatgagatgtatgttgagtgtaatatatgcaagaggcagttgtcttttcac
aacagcactacgactatgagggagcaccttgtccgcaaacataatatacgggacaacgcg
ccacctgtacttgataacacagcagtggccggggccccgattccagctacatcactccag
ccaatggcccagcccggattcccctgcaacatctctactacatctgccacagccaacaca
tgcatgttccagacagatttgcacatagttgtaaaagaggagcagcaggatgctgactta
tctcctgaacaagggatggccaaacgtgcccgaatcacatgtgctcctcccctagatgta
ggaagcggtgccaatgcaaaccctgtcaccagccaagatttggaaccgtcaaactcaaat
actggattactatacagtgagaacaacaattttggtgataccaaccgtagtggcactgct
gtcaaagaatccaatggcaagcgtactggggttctgactgacctaatattggaaatggtg
tacagggacttgcagccactgtctgtggtggaggagaggggatttcgtcttctattgagc
tgcttagaaccacagtacccagtgccgtctccctctcagcttggcagccttctttggcat
cactatgatgttctgaaacggcacctgcagcagtatcttcagtctggcctggcgccacgt
tgcataacactttgcactgagtactggcagtccgtagcaggttgtgcggtgggagcaggc
ggtcggctcttcttcactgtaagtgcacattttgttgacaaagactggcgcttggcccgt
tgtgtgctgcagacctgtcccatgcccgatatcagagagaagatttgtgaaagagggttc
attcaatttggggacaccctgaaggcagttctttctgaattccatcttccccagagctct
gttttctgtgttgtacatgacactcccaggatctcagaggccagagggactgagaatatg
cgagttccgaaagaaaaagtgaatcgtactgctggaccacgccaatcacctcaggatctc
ccagaaggttgggtagcgttacactgtgcaggggaagccctcaaactctgcatccaggac
ggactatggatggaacctgtcagacaggctcttgcggaggcccgcaggattatctcacat
ttccagcatgacgcacctgctgccgccgctctgatccacaaggcagaggcggcgaataag
gcaggcgcttgtctagtgctggatgacccagggcgctgggcaaccgctatcgacatgtgt
gagagtctgctcgagctgaagtgggtggtgagctcagttctcgaggagcagaaagctgct
ccaaatttagcggaccaccagtggcgcctcctccaggaactggtgccagtacttaagacc
gtgcgcatcgctgcctccttcttgagcgaggacatcaatttgtccatctccgcccttatg
ccgtgcctgcatggcgtatctcgtgtcctagagcaacatatctcagagaccagctgccct
gtggcccggggagtaatggagacagtgcggtcagggatggagcgacagtggagactgggt
gaagaggaagccttactggacagccctgccgtcctctcctcattcctggacccgaggttt
aaggagctgcgcttcctcagcccacatgcacgtagtaggctgcacgacaaggtcaaggaa
ctattatctgctcaagcacaaatagaggtggaggaaatgagcagagagtgtgacaaagga
ggcgaggatgaggatggcgaagagggaagggaaaaggaagtgaggaatcggggattggat
cactcacagtcaaccatcgctcctctggattcacctgtgtcctgtgaatcaaatgaagag
ggggacattattgtgctgcagcaacagttaaaggggctgtcccagactgccccgtcacag
gtcagtggagagggactgggtgaaggctcgcgctgcagtgctggaaatggtcccaggaga
gtagcaggactgtctagcctgttaaaaggagacctacagccccctgcttataggcaagtg
agtcatgtgcccaaaagcatgtacgacatactgcttggagaggatcccactgagcgaatg
cctgagatccaccaacagctggagaactacattgcagagccgctgtgcaaacgcagcctg
tcacctctccactggtggcgctctaaggagcatcgcttccctgccgtggccagacttgcc
cgtacatttctggctatccctgctactgctgtgcctgcagacagggcctttgctcctaga
gagactactgttgctcaacgcagggccattctggggccccagcatttggatcatattcta
ttccttcaccagaacagtgactatgtggagaaactgatgggaggatctacggggcatgaa
gagaggggcggtgacaggaatggagccaagcagactctgtatcagtctttagtgtcctac
gagagcaaggcttgggtgggaggggagaagttgtga
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