KEGG   Salmo salar (Atlantic salmon): 106603198
Entry
106603198         CDS       T04363                                 
Name
(RefSeq) period circadian protein homolog 1-like
  KO
K21944  period circadian protein 1
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106603198
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    106603198
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 106603198
NCBI-ProteinID: XP_014052005
UniProt: A0A1S3RII5
LinkDB
Position
ssa04:38523081..38531941
AA seq 1519 aa
MSDENAYTTSGNDTSGVSLAEDAVAGQEAGPQSPESGLSQTGSSGSSNGNGKRTRSGGKS
SPKSSNSDDTDAHLSGNDSAEREVEGHMGHETSTCSSSHNGKDSAMETTESKSSNSQSTS
PPNSSMVYSLLSGSSELDHPSTSGCSSGQPARLQTQRELLKALKELKIRMPADHRTKGRS
STLASLQYALNCVKQVRANQEYYHQWSVEESHGCSLDLSAFTTEELDNITSEYTLQNTDT
FSVGVSFLSGKVVYISPQASPMLRTKPERLQGALFSELLAPQDVSTFYSSTAPCRLPPWA
SCTGSMTSPVDCTQEKSMFCRISGGRDSEGEVRYYPFRMTPYQLTLRDSDMSQPQPCCLL
IAEKVHSGYEAPRIPADKRIFTTSHTPSCLFQEVDERAVPLLGYLPQDLVGTPVLMYLHP
DDRPVMVAIHKKILQSAGQPFEHSPLRMCARNGEYLTIDTSWSSFVNPWSRKVAFIVGRH
KVRTSPLNEDVFTPTVEVEARTMSPEIPRLSEQIHRVLVQPVHSGGSQGYCSSHGSHPQR
PSPGSSSGSNSPSIKELILKTIQRPPQMTFQQMCKDVHMVKTNGQQVFTKSRNRPALRKH
ASTGALVVPENLNKDLGPIGALEPTKTLASVQSRKDLSANYSYQQINCLDSIVRYLESCN
VPNTVKRKCGSSSCTTSSTSDDDKQRELPGTAKDLEGPQGNEGSKGGPQMSPLALHCKAE
SVVSVTSQCSFSSTIVHVGDKKPPESDIVMMEETPATPTLTVTSPATATNNAITMAVTPR
PLALPSPAPPSPAQPERDGRRSAGCSGRLGLTKEVLSAHTQQEEQVFLSRFRDLGQLCVL
DPGPPSLRGHTITPKGVRSSKDYPAGGHGRRRGRGGKRLKHQQEGSQRRMNGSFRREGQG
RQGLTFPMGQPLMMQGPLTSSSSWPTSVASEASLPPAVAQYPPGVLPFFPLYPSMQQQVL
AHTGVNPNAMQMGYPSPQPGLQYPMHANQMPMPMAPPMMVVLPNYMFPQLNGGVPQLHTA
MPQYNTTIPHLCPGIPAMAQLNHALPQFKQTFPLPQLNPGLAQFNPALTQMNGIPRVSPT
LAQLNPSQVKPTLSMIPQYCYDPSPALPFPNPIPIPGLPGFALPEMDPTFVQRGNSRSST
PQSTCQAPLEGTDSPLFQSRCSSPLNLLQLEELPGNRQEGMSTGAQQTLPPPGSLSQFGG
QGSVKRSMKGDAREDDNDDADDQDAMSTSSDLLDLLLQEDACSGTGSAASGSSGSGSNGC
STSGSGTRSSNTSKYFGSVDSSENDHSHKQAPGGAEEAQLMKYVLQDPIWLLMANTDDKV
MMTYQMPTRDKETVLREDGMILRAVQKQQPRFTEAQKRELIQVHPWMGTGRLPQAINSPT
CTGCGSPPTTSGPRPFNVELQDMDLTGVLQLQEETPVNMATETHDTSIPQAPQTETKGGE
GERQREQEGDGKDTRVKELEVTSSSGTEKGDSGCKRQPRSSIWPMTLKHNALGQPGAKHT
VNVLCLNKEVNMDKESKNT
NT seq 4560 nt   +upstreamnt  +downstreamnt
atgagtgatgagaatgcatacaccacttctggaaatgacactagtggagtaagtttagca
gaagatgcggtggcaggacaagaggcaggcccccagtcccctgagtctggactgagtcag
actggcagctccggcagctccaatggaaatggaaagagaactcggtctgggggcaagtct
tcccccaagtcctcaaactctgatgacaccgatgcccacttgagcgggaacgactcagcc
gagagagaagtggaaggtcacatggggcatgagacatcaacctgcagcagctcccataat
gggaaggactctgctatggagacaaccgagagcaaaagctccaactcccagagcacttcc
cctcccaacagctctatggtctacagtctgctgagtggcagctcggagctggaccacccg
tccaccagcggctgcagcagtggccagccggcccggctgcagacccagagagagctgctc
aaggccctgaaggagctgaagatccgcatgcctgcagaccaccggacaaaaggccgctcc
agcactctggcctccctgcagtacgctctcaactgtgtcaaacaagtcagagcgaatcag
gagtattaccaccagtggagtgtggaggagagccacggttgcagtctggacctctcagcc
ttcactacagaggaactggacaacatcacctctgaatacacactccagaacacggacacg
ttctctgttggagtgtccttcctctctgggaaggtggtgtacatctccccccaggcctct
cccatgctgcgcactaaacctgagcgactacaaggggcgctcttctctgagctgctggcc
ccccaggatgtcagcactttctacagcagcacggctccctgccgcctgcccccctgggcc
tcctgtactggctccatgacctcccctgtggactgcacccaggagaaatccatgttctgc
cgtatcagtggtgggagggacagcgagggggaggtgcggtactaccccttccgtatgacc
ccctaccagctgacactgcgggactctgatatgtcccagccacagccctgctgccttctc
atcgctgagaaggtgcactcaggatacgaagctccccgtatcccagctgacaagaggatt
ttcaccactagccacacccccagctgtctctttcaggaagtcgatgaaagggctgtgccg
ttgctaggctacctgccccaggacctggttgggacccctgtcctcatgtacctccaccct
gatgacaggcctgtcatggtggccatacacaagaagattctccagtcagcgggccagcct
tttgaacactcgccccttcgtatgtgtgcccggaacggggagtatctcaccatagatacc
agctggtcatccttcgttaacccctggagccgcaaagtggccttcatcgtgggtcgacac
aaagtcagaacgagtcccctgaacgaggatgtgttcacgcctactgtggaggtggaggcg
cggaccatgtcaccagagatccccaggctcagtgagcagatccaccgcgtgctggtgcag
cctgtccacagtggtggctcccagggctactgcagctcccacggatcccacccacagagg
cccagcccaggctcctcgtcaggcagcaacagcccctccatcaaggagctcattctgaag
accatccagagaccaccacagatgacattccagcagatgtgtaaggacgtccacatggtg
aagaccaatggtcagcaggtcttcaccaagtcccgcaaccgcccagcactccgcaaacac
gccagcactggagccctggtggtgccagagaatttaaataaggacttgggacctattgga
gctctggagccaactaaaaccctggcctcagtgcagtcaaggaaagacctgtcagccaac
tactcctaccagcagatcaactgtctggacagcatcgtacgctacctggagagctgcaac
gtccccaacacagtgaagaggaaatgtggctcctcctcctgcaccacgtcatcaacgtca
gacgatgacaagcagagggagttgcctggaacagctaaagatctcgaaggcccccagggt
aatgaagggtctaaaggggggccacagatgagccctctggcgctgcactgcaaggctgag
agtgtggtctctgtcacgtcccaatgcagcttcagcagcaccatcgtccacgtaggcgac
aagaagcccccagagtcagatatagtaatgatggaggagacaccagccactcccactctc
accgtcacctctccagccacagccactaacaacgccatcacgatggcagtgaccccccgg
ccattggccctgcccagcccggcaccacccagccccgcccagccggagagagacggccgc
aggtcagctggatgctcaggccgcctgggtctgaccaaggaggtgctgtctgcccacacc
cagcaggaggaacaggtgttcctgagccgcttcagagacctgggacagctatgtgtgctg
gaccccggccctccttctctgagaggacacaccatcacacccaaaggagtgcgcagctcg
aaggactacccagcaggtggtcatggacggaggaggggccgcgggggaaagaggctgaag
caccagcaggagggctcccagcgtaggatgaacggtagtttcaggagggaagggcaaggg
cgccaaggcctcacgttccccatgggtcaacccctgatgatgcagggaccccttacctcg
tcctcttcctggcccacctctgtggcctctgaggcaagtctccctcctgccgtggcccag
taccctccaggagtcctgcccttcttcccactctaccccagcatgcaacaacaagtcctg
gcccacaccggagtgaaccccaatgccatgcagatgggctaccccagcccccagccaggc
ttacagtaccccatgcatgccaatcagatgcccatgccgatggctcccccaatgatggtt
gttctgcccaactacatgttccctcaactcaacggaggtgtaccacagctccataccgcc
atgcctcagtataacacaaccataccgcacctttgccccggtatccctgctatggcacaa
cttaaccacgcactaccgcagttcaaacagactttcccactaccacaactcaatcctgga
ttggctcagttcaaccccgctctgacgcagatgaatggcatacctcgtgttagtcccacc
ctagctcaactcaacccgtcacaggtcaaacctactttgtcgatgatcccccaatactgt
tacgatcccagcccagcattacctttcccaaatcccattccgattcccgggcttcccggc
tttgccttacccgagatggatcccaccttcgtccaacgtggcaactcccgctccagcacc
cctcagtccacgtgccaagcccccctggaggggacagactcgcccctcttccagtcccga
tgctcctcccccctcaacctgctacagctggaggagttgccaggcaaccgccaggagggc
atgtcgacaggggcgcagcagacattgcccccacctggctcgttatctcagttcggaggt
caaggctctgttaagcgaagcatgaagggtgacgccagagaggacgataacgatgatgct
gatgaccaggacgcaatgtccacctccagtgacctgctagacctactgttgcaggaggac
gcctgctcaggcaccggctcggccgcctccgggtcctcaggctctggctctaatggatgc
agcacctcagggagtggcacaagaagcagcaacaccagcaaatactttggcagcgttgac
tcgtcggagaacgaccattcccataagcaggcaccagggggggctgaagaggcccagctc
atgaaatatgtccttcaggaccctatctggctccttatggccaacacagatgacaaggtt
atgatgacgtaccaaatgcccaccagggacaaggagactgttctaagggaggatggtatg
atactgagggcggtgcagaaacagcagccgcgcttcactgaggcgcagaagagagagctg
atccaggtccacccctggatgggcaccggacgcctgccacaggccatcaacagccctact
tgtacagggtgcggttctcctcccactacctccggccctcggccctttaatgtggagctg
caggacatggatctgacaggggtcctccagctacaggaagagacgccggttaacatggca
acagagacacacgacacctccatcccacaagcaccccagacggagactaaggggggcgag
ggtgagaggcaaagggagcaggaaggagacggtaaggacaccagagtgaaagagttggag
gtgacgtcatcatccggaacagagaaaggggactctggctgtaaacggcaaccgaggagt
tctatatggccaatgactctaaaacacaatgcattgggacaaccgggggccaagcacact
gttaatgtgttgtgtttgaacaaagaagtgaacatggataaggagtcaaagaatacctga

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