Salmo salar (Atlantic salmon): 106603236
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Entry
106603236 CDS
T04363
Name
(RefSeq) afadin-like
KO
K05702
afadin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04520
Adherens junction
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
106603236
04530 Tight junction
106603236
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIL
RA
PDZ
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
106603236
NCBI-ProteinID:
XP_014052091
UniProt:
A0A1S3RIQ2
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Position
ssa01:42089853..42150291
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AA seq
1285 aa
AA seq
DB search
MAGKEEWQRLADIIQHWNNTRLDLFEISLPCKNLEFHGVMRFLFEDHVAGNVATKCLRIN
STTTTGEVIETLSEKFRPDMKMLNTPYFLFEVHANKEERQLDLSEKPLVVQLNWNTDNRE
GRFVLKKDKDIIDNSPEKKKGGMIQNFKRTLSRKEKKKEKKKTGEDAVNHSAKPNGSTMR
KENGQISASVPVEKSSTNKDIVSNADTMECKRSSTWGGVIKPMVRKHNQQQDYGTRNERD
QDNMDQLALPVGIQFRENSEDPFLSAVINYTNSSTVHFKLSPAYVLYMAGRFALHRRSSH
SQETPQSHRPSEHAHRVTTTVNKMVAMTEVVIQKQKSIAGAVAFWMANASELLNFLKQDR
DLSPITLQAQEDLAHLVHKAFKCLTRCLLDDLSRHLPGFLIYPEGSQSPAGIEGVLQTLM
GAMSLLRRCRINAALTIQIFSQLFHSISAWLFNRLLSPSPQGEACSLGLRSHYWGATLRQ
RLSLVEDWAERQGLELAADCHLSRIIQITMLLTMNKYSMQDSENIQNTCFKLNSLQLRTL
MTSYLYDTNEPRIPPGLIDRVVAAAEASADELLRSEGQDLQLEEGPDLHLPFLLPEEGYS
CDTVNGIPQGFREFLEPICRKGLCTLISHPHSGGTWTIFFNRANSFSAQDANPPLHREPE
VVTITLTKPLNSGMGVSIVAAKGAGQDNLGIYVKSIVKGGPAEMDCRLTAGDQLLCVDGH
SLVGLSQERAAGIMMHTGPVVTLQVAKQGATCHGLAALLDEPPSVSTTALDGSGPTSSSH
AKPNGKALILYDGMEQSPGPSGLWGNNPHGGNRRQREQTLLKNRQLYRSNPNMIIPEGEP
VDPVIPTDGKITAVSTSNLLCSDMYHREYLTLPAPRSQDKKTVAFELPPQGPRVSFNLDG
QISNKRTLMALSQENLCMENDCPLVDNIHNAWNQNQQESYYSSFPMKPSISTHDIHYNHT
VSLSTKTQPSRHNTGYGYWRTPTSHNPSSAVQPIHIDIPATRLSNTQPRTPMTTFQQTPT
LLPVKLNQNPEGKGQGQALLSNQKQGSHYQLPAQHRQAACPPPSSVSLRQPLPSLSSSQK
IQQQQALRRVQPAMSKLFPTQSKDTSLQRSPAKPQPGTTPGHQDQYFSMNKEPPSEGNKG
LSPDPWKRDAREKQQKQQRLQVVDLLEQEVQDLQAKAQLTPEETNRLRRLNLEWQFQQRL
QEFQQNGNDDDDDDEDEEEEDRDTSTGEHVQESNELNENFDEKCSKEGQEENNFKGDATP
ENLTFKERQRLFSLGSNASIKVKAL
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaaggaagagtggcagagattagctgacatcatccaacattggaacaacacc
cgactggacctgtttgagatcagtctgccatgcaagaacttagagttccatggagtgatg
cggttcctctttgaggaccatgttgcagggaatgttgccaccaagtgcctgcgtatcaac
agcaccaccaccactggagaggttattgaaacactgtcagagaagttcagaccggacatg
aagatgttgaatactccctatttcctgtttgaggtccatgctaacaaggaagaacggcag
ctggacctgagtgaaaagcctctggttgtgcagctgaactggaacacagacaacagggag
ggccgcttcgtactcaagaaggataaggacattattgacaacagcccagagaaaaagaag
ggaggcatgatccagaacttcaagaggacactgtcgaggaaagagaagaagaaggagaag
aagaagacgggagaggatgctgttaaccactcggcaaagcctaatgggtccactatgagg
aaagagaatgggcagatatcagcttctgtacccgtggagaagtcctcgaccaacaaggat
attgtttctaacgctgacacaatggaatgcaagagaagttccacgtggggaggcgttata
aagcctatggtccggaagcataaccagcaacaagactatggaacaaggaatgaaagagat
caggacaacatggaccaacttgcacttcctgttggtattcaattcagggaaaattctgag
gaccccttcctctctgcagtcatcaactacaccaacagttccactgttcacttcaagctc
tcccctgcctacgtcctgtacatggccggacgcttcgcccttcaccgccggtccagtcac
agtcaggagacaccacagagtcatcgcccctcagagcacgcacacagagtcaccactact
gtcaacaagatggtagccatgactgaggtggtcatccagaagcagaagtccatagctggt
gctgtagccttctggatggccaatgcctcagagctcctgaacttcctaaagcaggacaga
gatctaagccccatcacactgcaggctcaggaggacttagcacacctggtgcacaaagct
ttcaagtgtttgactcggtgtctgctggatgatctgagcagacacttgccaggattcctg
atttatcctgaggggagtcaatcacctgcaggaatagagggtgtactgcaaaccttgatg
ggtgccatgtctctgctgcgtcgctgtcgaatcaacgctgccctcaccatccagattttc
tcccaactcttccactccatcagcgcctggctcttcaataggctgctaagccccagcccc
cagggagaggcctgctccctgggccttaggtcccactactggggggccaccctccgccag
aggcttagcctggtggaggactgggcagagaggcaaggtctggagctggccgcagactgc
cacctcagccgcatcatacagataacaatgctgttgaccatgaacaagtattccatgcaa
gattcggagaacatccagaatacctgcttcaagttaaactccttgcagcttcgaacactg
atgacaagctacctctacgataccaatgagccccgcattccccctggtttgattgacagg
gtggtggcggctgcagaggccagtgctgatgagttgttgcgtagtgaagggcaggacctc
cagctggaggaggggccagacctccacctgcccttcctgctccctgaggaaggctactcc
tgtgacacggtcaatggaatcccacagggcttcagagagttcctggaacctatctgccgc
aaaggcctctgcactctgatctctcacccccactctggtggcacctggaccatcttcttc
aacagagcaaacagtttctctgcacaggacgcaaacccgccactgcatagagaacctgag
gttgtgactattacactgacgaaacccttgaacagtggaatgggggtcagcatcgtggcg
gccaagggagcaggacaagacaaccttgggatttacgtcaagtctatcgtcaaaggagga
ccagcagaaatggattgcaggttaactgcaggggaccagttgctgtgtgtggatggacac
agtctcgtgggcctctcacaagaaagggcagcaggcataatgatgcacactgggccagtt
gtgactttacaggttgccaagcagggggcaacatgccatggtctggctgccctgctagat
gaaccaccttcagtatcaactacagctttggatggtagtggccccaccagcagcagccat
gctaagccgaacggcaaggccctgatcctgtatgatggcatggagcagagccctgggccc
tcaggactatggggtaataacccccatggagggaacaggagacagagagaacagaccctg
ctgaagaacagacagctataccgctccaaccccaacatgatcatcccagaaggagaacca
gttgatccagtcatcccaacagacggtaaaatcactgcagtctccaccagcaaccttctg
tgctctgatatgtaccacagggaatacttgactctaccagcccctaggtctcaggacaag
aagacagtagcctttgaactcccacctcaggggcccagagtctcgtttaatctagacgga
cagatctccaacaagaggaccttgatggccctttcacaggagaacctgtgcatggagaat
gattgccccctagtggacaatatacataatgcatggaaccagaaccagcaggagagctac
tactcctcttttcctatgaagccgagcatctctacccacgacatacattacaatcatact
gtcagcctctccactaagacccaaccaagccgccacaacacagggtatggctactggaga
actcctacgtcacacaacccttcgtctgccgtccagccaatacacatagacatccctgct
acacggctttccaacacccagccacgcactccaatgactaccttccaacaaactccaact
ttactgcccgtgaagttgaaccagaaccctgagggtaaaggccaggggcaagccctcctc
agcaatcaaaaacaagggtctcattatcaattgccagcccagcatcgccaagctgcatgt
cctcctccatcctctgtgtccctgaggcaacctctgccctcactctcatcctcacagaag
atccaacaacaacaagccttgaggagggtgcaaccagcgatgtccaaactgttcccaacc
cagtcaaaagacacatccctccagagatctccagctaaaccacaaccagggaccacccca
ggacatcaggaccaatacttcagcatgaataaagagccaccatcagaaggcaacaaaggt
ctgtctccagacccatggaagagggatgcacgggagaagcagcagaagcagcagagacta
caggtggtcgacctgttggaacaggaggtccaggatctgcaggctaaagcccagctcaca
ccagaggagaccaacaggctccgtaggctcaacctggagtggcaatttcaacagagactg
caggagttccaacagaatggaaacgatgatgatgatgatgatgaagatgaagaagaagaa
gatagggacacgtcaacaggagaacatgttcaagagtcgaatgaactcaacgagaacttt
gatgagaagtgctcgaaagaaggccaggaagagaacaacttcaaaggtgatgcaacacct
gagaatctcacatttaaggagcgccaacgtctcttctccctcggatcaaacgcctccatc
aaggtcaaagccttgtaa
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