Salmo salar (Atlantic salmon): 106603248
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Entry
106603248 CDS
T04363
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106603248
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Protocadherins
106603248
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
106603248
NCBI-ProteinID:
XP_014052100
UniProt:
A0A1S3RIR2
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Position
ssa04:complement(39539691..39556386)
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AA seq
1005 aa
AA seq
DB search
MDLRGSKRRLGGIWQGTCLALVVCVLDLVWAQIRYSIPEELEHGAFVGNIAEDLGLDVER
LSARRFRIVSGAKKQYLEVNLENGILFVNEIIDREELCEQSLSCSFHLQVVIENPLELYR
VEVEILDVNDNSPSFPWSEFNLDISESAVPGSRFPLESAQDLDVGSNSLRSYLLSVNEHF
VLDIQTRSDGSKFAELVLESPLDREQQNTHQMVLTAVDGGSPERSGTAQINITVLDANDN
APVFDQSFYRVRLVENAPKGTVVIKLNASDLDEGPNADITYSFSGHAPIKVRELFSVDSR
TGEIRVKGVVDYEKARMHEIYVQAKDKGPSAVAVHCKVLVNILDVNDNLPEVILTSVSTP
VQEDAPPGTVIAVISVMDKDSGENGNVDCEIPHHVPFQLHSSFKNYYTLVTCDFLDRETV
PEYNITLTARDMGAPPLFTRKTILVQVSDMNDNTPRFKQPSYTVYLTENNAPGASICSVT
ALDPDSDQNAYLSYSILEGDIQGMPVSTYVSINSDNGNIYALRSFDHEQLRNFQILVQAQ
DAGFPPLRTNVTVNVFILDQNDNAPVIVAPLPQNGTAATEVVPRSVDAGYLVAKITATDA
DAGQNSRLFYQVLQANDPSLFSVALYTGEIRTIRRFVEKDPIRQMLVILVKDNGQPPLSA
TVSIILSVVDNVPESLPDFGDLTLSPQYRSNLTLYLIVSLGVISFTFLVAIIVLAAIKGY
RDRHSIRRYNFSLSACCRFRSEESTTDVFKKSNLNVHITTGTKGSTNCVEANGNGPLSQP
YCYKMCLTPESSKSDFMFLKSCSPMNATPQKNNAKGADYPKSGWSAQDSRSLIVNNGPTI
PNELKQAKMDWTLTKNQRNSAHKSFSSMERTFPRRPRPDPDGFSCPVAPQYYTWGSHMRA
EYKMSSQVEGIGGVGSVGSVGRVPNRLWTPSSTQPPSAQPPPDYQHNVYIPGTPSGYCTL
KPAPRGELDVYNSFSTFGKKKRFISSYDPSFDQREDNLINNDLFK
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggacctccgaggctcgaagagacggcttggggggatatggcaggggacatgcctagct
ctcgtcgtatgtgtcctggatttagtttgggctcagattcgttattcaatccctgaggaa
ctggaacatggcgcttttgttggaaatatagccgaggatttgggtttagacgtcgagaga
ctctctgcgcgcaggttcaggatagtttcaggcgcaaaaaagcaatacttggaggtgaat
ttagaaaatggtattttatttgtaaacgaaataattgatcgagaggaactatgtgaacag
agtctgtcttgctctttccatttgcaagtggtaatcgaaaacccattggaactgtacagg
gttgaggtggagattttagatgtgaacgataactcacccagttttccgtggagtgagttt
aatttggatatatccgagtcggcggtacccgggtcccgcttcccactagagagcgcgcag
gacttggacgttggcagcaactcgctccgctcttatctgctgagtgtgaatgaacatttt
gtcctggatatccagacgcgtagtgatggcagtaagtttgcggagttggtcctggagagc
cccttggacagagagcagcagaatacgcaccaaatggtgctgacggctgtggatggaggc
tcgccagagagatccgggacagcgcagatcaatataacagttctggatgcaaatgacaat
gcgcccgtgttcgaccagtctttctacagagtgaggcttgtggaaaacgcaccgaagggc
accgttgtgataaaactaaacgcatcggatttggatgagggtcctaatgcggatatcaca
tactctttcagcgggcatgctcccataaaagtgcgcgagcttttcagtgtggattcgcgc
actggagagatcagagtgaaaggggtcgtagattatgaaaaggccaggatgcatgagata
tatgtgcaagccaaggacaagggcccatcggcagtggccgtgcactgtaaagttctggtc
aatatcttagatgtgaacgacaacctcccggaggtaatcttgacatcagtgtccacacct
gtccaagaggacgcaccaccggggactgtgatagctgtcatcagcgtcatggacaaagac
tcaggtgaaaatgggaatgttgactgtgaaattccacatcatgtccccttccagctccac
tcctcttttaagaactattacactttggttacttgtgattttttggacagagagacggtg
ccagagtacaacatcactctcacagcaagagatatgggtgcacctcccttgttcacaagg
aaaactattttagttcaagtgtcagacatgaacgacaacacacctcgattcaagcagcca
tcatacaccgtctatttgacagagaataacgcaccaggagcctcaatttgctcggttact
gccctggatccagattcagaccaaaatgcctatctctcttactctattctggaaggtgat
atacaggggatgcccgtgtccacctacgtctccataaactcagacaacgggaatatttac
gcattgcgttcttttgaccatgagcagctaagaaactttcagattttggtccaagcacaa
gatgccgggtttccacccctgagaaccaatgttaccgtaaatgtctttattttggaccaa
aatgacaatgcaccagtcatagtagcacctctaccccaaaacggcaccgcggcgacggaa
gtggtgcccaggtcagttgatgctggctatcttgtggcaaaaattactgcgacggacgca
gacgcaggtcaaaactcgcgtctgttctaccaggtgctccaggcaaacgacccgagcctg
tttagcgtcgcattgtacacgggcgaaattaggacgattcgccgatttgtggaaaaagac
cccataaggcaaatgctggtcattctggtcaaggacaacggtcagccacccctttcggcc
acagtttccatcatcctgtcagttgttgacaacgtgccagaatcgctgcctgatttcggc
gacctcacactgagcccccagtaccgctcgaacctcacgctgtacttaatagtgtctctg
ggcgttatctcgttcacgtttctggtggctattatcgtcctggcagcgataaagggatac
agggacagacattccattcggaggtataacttctctctgagtgcatgctgcaggttccga
tcagaggagtcgaccactgatgtgttcaagaagtccaacttgaacgtgcatataaccaca
ggtaccaaaggatccacgaactgcgttgaggcaaatggcaacggccccctttctcagcca
tactgctacaagatgtgtctgaccccggaatcatccaagagcgatttcatgttcctaaag
tcatgcagtccgatgaatgcgactccacagaagaataatgccaagggcgcagactacccc
aaatcgggttggagcgcacaggactcccgcagcctgatagtgaacaacggaccaactatt
ccgaacgagctcaagcaagcgaagatggactggacattgacgaaaaatcaacgaaattca
gcacacaaaagctttagctccatggagaggaccttcccacgtagacccaggccggaccct
gatggtttctcctgcccggtggcaccacagtactatacctggggtagtcatatgcgtgca
gaatacaagatgtcctctcaggtcgaagggattggaggggtaggaagtgttggaagtgtt
ggaagggttccaaaccgtttgtggactccgagctccacccagcctccatctgcacagcca
ccacctgactaccagcacaacgtctacatccctggcactccgtctgggtactgcactctg
aagcctgcaccccggggggaactggatgtctacaactcattctccacgtttggaaagaag
aagaggttcatctctagctatgacccgagctttgaccagagagaggacaacctgataaac
aatgacctttttaaatga
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