Salmo salar (Atlantic salmon): 106603301
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Entry
106603301 CDS
T04363
Name
(RefSeq) TBC1 domain family member 8B-like
KO
K19951
TBC1 domain family member 8/9
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106603301
Membrane trafficking [BR:
sasa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106603301
Endosome - Golgi transport
Rab GTPases and associated proteins
106603301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
106603301
NCBI-ProteinID:
XP_014052281
UniProt:
A0A1S3RJ75
LinkDB
All DBs
Position
ssa04:42742210..42760998
Genome browser
AA seq
1137 aa
AA seq
DB search
MWLKPEEILLKNAFKLWVTEKGNDYFVLQRRRGYGEGGGGLTGLLVGTLDTMLDSTSKVA
PFRILHQTPDSQVYWSIACGGTKEEISQHWEWLEKNIMRTLSVFDSSDDITSFVQGKIRG
LIAEEGKVSCVQEDDPEKFREALLRFEKWFDLPQKEKLVTYYSCSYWRGRVPCQGWLYLS
TNFLSFYSYLLGSEVKLIISWNEIWRLEKTSNVILTESIHVLANGEDHFFSMFLHLNETF
LIMEQLADYSIKRLFDKETFQEEPSLSDPLQITKRGLETHARNEQFRAFFRLPKEENLLE
VYESFLWVPFSHFNTLGKICLSESYLCFASQDGSQCHVIIPMREVIGVEKPDRSSRALIV
CVRGKRALRFSEVRDFERLANAIRRRCGMTASPQHSASTEVIRGECQNLINHFEDNPEEV
ALMVGQKDSSKAVSTEALMTVFHPQDTENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFCT
KKTRDLIVRGVPEALRGELWMLFSGAVNDMATNPGYYSELVDQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEELIRMHLTQLTEHMTDLTFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMEGLISSHDDAEAVTILNKFFDNVTNKD
SPLPQTVQQNSVGNNDKASSSSKVDVSDLIKEAYEKYGDMKSEEVESMRKRNKLYVIQTL
EDTTKQNVLRVVSQEVKFSASQLDELYVLFKRQHFLSCYWMMNSPVLLHHDPSLAYLEQY
QLGFHQFSLLFSLLEPWSLCSGKDTLFLWAFRLLDENQDGLINFKEFCCALDILYSGTFT
NKLKFLFKLHQPPAFTGSPFQSKAQGLPHFIPMTDDLSHLSRLTVSDLPEDGVIRKSPER
GRGKVDLQAYLKQWQDEILKKEECIKDLPRINQAQFIQFSKTLYNLFHSDPEEESLYRAV
ARVTSLLLRMEEVGRRLQEPTSPQKSTTSPIQAALEGALPDGEASSTPDSSSDTPSTPIT
LEAGSIPQEVEWSFAFEQILASLLNEPVLVRFFERPVDIQARLDHAKCAQLKAKTNK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttaaacctgaagagatattgctgaaaaatgcattcaagttatgggtgacggaa
aaaggcaacgattatttcgtattacaaaggaggcgaggatatggagaaggaggaggcggt
ttgacaggtctcctggttggaactctggatacgatgctggactctacgtctaaggttgcg
ccgtttcgcattctacaccagacaccggactcccaggtttactggtctatagcatgtggt
ggcaccaaggaggagatcagccaacactgggagtggctggagaagaacatcatgagaacc
ctgtctgtgtttgactccagcgatgacatcaccagctttgtgcagggcaagatcagaggt
ctgattgctgaggaaggaaaggtgtcatgcgtgcaggaggatgaccctgagaagttccgt
gaggcgttgctgaggtttgagaaatggtttgacctccctcagaaggagaagctggtcacc
tactactcctgcagctactggaggggtcgcgtgccctgccagggctggctctacctcagc
accaacttcttgtccttctactcctacctgctgggctccgaggtgaagctgattatctcc
tggaatgagatctggaggctggagaaaacgtccaatgtcattctgacggagagcatccat
gtgttggccaatggggaggaccacttcttctccatgttccttcatctcaatgagacattc
ctgatcatggagcagctggctgactactccatcaaacgcctgtttgataaggagactttc
caggaagagccctccctttcagaccctctgcagatcaccaagagaggcttagaaacgcac
gctaggaacgagcagttccgggccttcttcaggctgcctaaagaggagaacctgctggag
gtgtatgagagcttcctgtgggtgcccttcagccacttcaacacactggggaagatctgt
ctttccgagagctacctgtgtttcgccagccaggatggcagccagtgccacgtcatcatc
cccatgagagaggtgattggtgtggagaagccagaccgtagcagcagggctttgattgtg
tgtgtgcgaggtaagagggctctacggttctctgaagtccgagactttgagcgcctcgcc
aatgcaatccgcaggaggtgtgggatgacggccagtcctcagcactctgcatcaactgag
gtcatcagaggggagtgccagaacctcatcaatcactttgaggacaacccagaggaggtg
gctttgatggtgggacagaaggacagcagcaaggctgtcagcactgaggccctcatgacc
gtgttccatccccaggacaccgaaaacctggaccccaaaatgctgaaagagaagatgaag
gagcagtcatggaacatccacttctcagaatatggccgtggcaccagtatgttctgtacc
aagaagacacgagacctgattgtgcgtggcgtccctgaggccttaaggggagagctctgg
atgcttttctcaggtgcagtcaacgacatggccactaacccggggtactacagcgagctg
gtggatcagtctctggggaccagcaccctggccactgatgagatagagagagacctgcac
cgctccctaccagagcaccctgccttccaaagcgacacaggcatctctgccctgcgcaga
gtcctcactgcatacgcctacaggaaccccaaaatcggctattgccaggccatgaacatc
ctgacgtcagtcctgttgctctatgcaaaagaggaggaggctttctggctgctggtggcc
gtctgtgagaggatgcttcctgactacttcaaccgcaggatcattggtgcactggtggac
caggcagtgtttgaggaactgatccgaatgcacctcacccagctgacggagcacatgaca
gacctgaccttcttctcctccgtgtccctatcctggttcctcaccctgtttatcagcgtt
ctgccaatagagagcgctgtcaacgtggtcgactgcttcttctacgacggcatcaaagcc
atcctgcagctgggcctggctgtgctcgactacaacatggagggcctgatcagctcccat
gacgacgctgaggcagtcaccatcctcaacaagtttttcgataatgtgacaaataaggac
agtcctcttccacaaacagtgcagcaaaactctgtagggaacaacgacaaagcatcatcc
agctccaaggtggacgtcagtgatctcatcaaagaagcctatgagaaatatggagacatg
aaatcagaggaagtagagagcatgcggaaaagaaacaaactatatgttatccaaacgtta
gaggatacaaccaagcaaaatgtgctgcgggtagtgtcacaagaagtaaagttcagtgct
tcccagcttgacgaactttatgtattgttcaagaggcaacatttcctcagctgctactgg
atgatgaacagcccagtcctgctgcaccacgaccccagcctggcctatctggagcagtac
cagctgggcttccatcagttcagcctgctcttctccctcctggagccctggtccctctgc
agcggcaaggacaccctcttcctctgggccttccgcctgctggatgagaaccaggatggc
ctcatcaacttcaaagagttctgctgtgccttggacattttgtacagtggcactttcacc
aacaaactgaaattcctgttcaagcttcatcagccaccagctttcacaggtagtcctttc
caatcaaaggcccaaggactgcctcactttattccaatgactgacgacctatcccacttg
agtcgattgactgtgtctgatcttccagaagatggcgtgatcagaaaaagtcctgaaaga
ggtagagggaaagtggatctgcaggcctacctgaaacaatggcaagatgagatactaaag
aaagaggagtgcattaaggatttacccagaattaaccaggctcagtttatccagttctcc
aaaacgctctacaacctgttccatagtgaccctgaggaagagtctctgtaccgtgctgtg
gctcgagtcaccagtcttctgctgagaatggaagaagtagggcgcaggctccaggagccc
accagtccccagaagtccaccactagccccatccaggctgccctagagggggctctacct
gacggggaggcttccagcacccctgatagcagctctgacacacctagcactcccatcact
ttggaggcaggctccatcccacaggaggtcgagtggtcattcgcttttgagcagatcctg
gcatccctgctcaacgaacctgtccttgtgcgcttctttgagaggcctgtagacattcaa
gcccggctggaccatgccaagtgtgctcagttgaaagccaagacaaacaagtga
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