Salmo salar (Atlantic salmon): 106603314
Help
Entry
106603314 CDS
T04363
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106603314
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
106603314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
106603314
NCBI-ProteinID:
XP_014052306
UniProt:
A0A1S3RJ95
LinkDB
All DBs
Position
ssa04:complement(43827292..43846152)
Genome browser
AA seq
971 aa
AA seq
DB search
MVLELAVPANAGPLLHRSIHHIERIFRVRVSYGSAESSCDSANVSTSNIIIVRVAEGKED
DCTKAKDYIVSLTSPAHRKREHLTLAQHKQLVALKPAIEYDSQAVVEVREHVVDISGGER
NVMTAWSMVEKIKMEKHPCREEASELTEAQQPSGESEEGNSSESESEHQLQVNSGSCKRT
ELFSATKPHRQLCRSPCLDRPSFSQSSTLPELRPDDTKAAAVLKQASDKVYQTKMEFALK
LGYSGEQVETVLNKLGAAALINDILAELVRLGNKGELEVQASSNTGTLVSRGGPCVKEAV
SPEVSLEDDSVDPYDNLRPIVIDGSNVAMSHGNKEVFSCLGIQLAVDWFVEKGHKDITVF
VPAWRKEQSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDSDG
IIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVV
PEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRAFAKLSAVKTMSEGALAKCG
TGPATAKGESGSEAKRVTPKRQSDPSIRSVACEPEERLSAVRKPEANSVPSLVSALSVPT
MQPAKSHAAGALNTRSASSPVPGSLQFTHSSLEHMSSVQYPHPPILVTNSHGASVTYSEQ
FPKYDSVSTDHGYYSMLSDFSNMSMSSMHNVDSFCSMEHEHGVYLRNPSQHCPEPCLSHS
NSDSFSSYGELYMSSVDSSLDESMKGQQSPAQSRLQAFSHGGFHHEALTRVQSYGHEEPK
QGPCRKQSISHLAPHVQHPVVGARSSCPGDYPLPQNVLPSQSSQPGRSLGMTRMDSISDS
RLYESNPMRQRRPPLCREQHASWDPLPCGSESYGYHSYPLSNSLMQPCCERVMVRSMPDK
MEQIWRYPWENPPQAEHQERHVIPEHLYQTYRNLCNIFPAFVVHSVMEKNPHLTDPQQLA
AVIVTKLRSCH
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctggcagtgcccgcaaatgcaggccctttgcttcaccgctccatccac
cacattgagcgtattttccgggtgagggtcagctacggatccgcggagtcaagctgcgac
agcgcaaatgtcagcaccagcaatatcataatagtacgtgtcgcggagggcaaggaagat
gactgcaccaaggcaaaagattacatagtttccttaacttcgccagctcaccgaaagaga
gagcatctaacgttggctcaacacaaacagctggttgcactgaagccagccattgagtat
gactctcaagctgtggtggaggtgagggagcatgtggtggacatctccggtggcgagagg
aacgtgatgacggcatggtcgatggtggagaagatcaaaatggagaaacacccttgcagg
gaagaggcctctgagctgactgaggcccagcagcccagtggggagtcggaggaggggaac
agttcagagagtgagtcagagcatcagctgcaagtgaacagtggcagctgtaagaggacg
gagctcttcagtgccaccaagcctcaccgtcagctctgtcgctctccatgcctggaccgg
cccagcttctcccagagcagtactctaccagagctccgccctgacgacaccaaggccgcc
gcagtcctcaaacaggccagcgacaaggtgtaccaaaccaagatggagtttgccttgaag
ctgggatactccggtgaacaggtggagacagtgctgaacaagttaggggctgctgccctc
atcaatgatattctggctgagcttgtgaggcttggtaataaaggtgaactggaagttcaa
gccagcagtaacacaggcacgttagtctcccgtggaggcccctgtgtcaaagaggctgtc
agtccggaggtgtcacttgaagatgattccgtggatccttatgataatctcaggcctatt
gtcattgatggatcgaatgtggcaatgagccatggaaacaaagaggttttctcttgcctt
ggtatccaattggctgttgattggtttgtggagaaagggcacaaagacatcacagtgttt
gttcctgcctggaggaaagagcagtcgagacctgacgcccccattacagaccaagacatt
ttgcggaagctggagaaagaaaagatcctagtgttcaccccatctagaagagtccagggg
aggagagtggtgtgctatgatgatcgctttatagtgaaactggcctgtgactctgatggc
ataattgtgtcaaatgacaactacagggacttacagaatgagaagccggagtggaagaag
ttcatagaggagcggctgctgatgtactcgtttgtcaatgataaattcatgccacctgat
gatcctttgggaagacacggtccaagtttagagaattttctccgcaagcgtcctgttgtt
ccagagcacaaaaagcaaccttgtccatatgggaaaaaatgcacttatggacataagtgc
aagtactaccacccagagcgtgcaaaccagccccaacggtcagtggctgatgaactgagg
gcgtttgccaagttgtctgctgtgaagacaatgagcgagggggccctggccaagtgtggt
actggacccgccacagctaagggggagagtggctctgaggctaaacgtgtgaccccgaag
cgccagtctgaccccagcatccgctcagtcgcctgcgagccagaggagagactgtctgct
gtccgtaagcctgaggcaaattctgtgccttcccttgtgtctgccctcagcgtgcccacc
atgcagcctgcaaagagccacgcggctggtgccttgaacacacgatcagccagcagccca
gtacccggctctctccagttcacccacagctctctggagcacatgtctagtgtacagtac
ccacatccacccatcctagtcaccaacagccatggcgcttctgtcacttacagtgaacag
tttcctaagtacgattctgtgagcacagaccacggatactactctatgcttagtgatttt
tctaacatgagcatgagcagcatgcacaacgtggacagcttctgtagcatggagcatgag
cacggggtttatctgagaaatcccagccagcattgccctgagccctgcctcagccactct
aacagtgactccttttcctcttatggggaattatacatgagctcagtggacagtagcctg
gatgagagcatgaagggacagcagtctcctgcacagagcagactccaggccttctcccat
ggggggttccaccatgaggccctgacccgggtgcagagctatggccatgaggagcccaag
caaggtccatgcaggaagcagtccatatcccacctggcacctcatgtccagcaccctgtt
gttggggcccggtccagctgcccaggggactaccccttacctcagaatgtcctcccatca
cagtcctcgcagccgggacgctccctgggcatgacacgtatggacagcatctcagactcc
aggctgtacgagagtaaccccatgaggcagcgcagacccccactgtgccgcgagcagcac
gccagctgggacccgctgccctgtggcagtgagtcctatggataccattcgtaccccctg
agtaacagcctgatgcagccgtgttgtgagcgggtgatggtccgcagcatgcctgacaag
atggagcagatctggaggtatccgtgggagaacccgcctcaagctgagcaccaggagcgc
catgtcatcccagagcacctttaccaaacataccgtaacctctgcaacatcttccccgct
ttcgtggtgcactctgtcatggagaaaaaccctcatctgacggacccacaacaactcgct
gccgtcattgtcacgaagctgaggtcttgccattga
DBGET
integrated database retrieval system