Salmo salar (Atlantic salmon): 106603375
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Entry
106603375 CDS
T04363
Symbol
ercc6l
Name
(RefSeq) ERCC excision repair 6 like, spindle assembly checkpoint helicase
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106603375 (ercc6l)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
106603375 (ercc6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_34
SWI2_SNF2
TPR_11
MAS20
DEAD_2
Motif
Other DBs
NCBI-GeneID:
106603375
NCBI-ProteinID:
XP_014052436
UniProt:
A0A1S3RJK7
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Position
ssa04:45642413..45653279
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AA seq
1288 aa
AA seq
DB search
MDNSKHLIAKMSEKLEKSLSMDTEEMETYQRYIKDGKDAARQGNMSKSLELFKLAHDIHP
SDKLRSRIKKLQEAIKEMTQQGSESEDEDFVNVNNSGLMLFKEMYDKLYDHQQEGVAFLY
GLHRDGRQGGILADDMGLGKTIQVISFLSGMYDADLVKHTLLIMPTSLIKNWTKEFAKWT
PGMRVKEFHGTSKVERNRNLEKIQRRGGVIITTYQMLITNWELLSSYNGREFKWDYVILD
EAHKIKTSSTKTAKSAHAIPARNRVLLTGTPVQNNLREMWALFDFACQGALLGTSKTFKT
EYESPITRAREKDATPGEKALGLKMSENLMAIINPYFLRRTKAEVQRKTENRVKACEKDL
ENKVPSGGGAEMPNLTRKNDLIIWTYLSSVQEEIYNQFLSLDNIKELLMTTRSPLAELNI
LKKLCDHPRLLSARAVAQLGLEEGTSANYRDDENESAAHRIDNISDKTLISESGKLMFLI
ALLERLKEEGHRTLVFSQSRKMLDILERVLVNKCFKIVRLDGTVTHLTERERRIQMFQTN
KQYSVFLLTTQVGGVGITLTAANRVVIFDPSWNPATDAQAVDRAYRIGQMENVVIYRLIT
CGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSKQDLKELFTLQDTRSSSTQLQLQSLH
SRQRLTDPKLDEHIAYLHSMEMFGISDHDLMFSHEVENNEDDPEDQEAHKYIENRVQKAQ
ELMKAESELQQQLAESIESNTEPVHLRKPPQHNTMGSTKKKPNDEKPSPSYPSHNLNFNS
PVLVDLTHSGSSDEEDIHNLSNKFIDLAVDESIEITEPTVTFATEEQFIKSNHLCPIDES
LEVLLDGEPIYTSTQEILDVSSEAKEDVVAIGYVTSEVEQDNQPNGNGSPQWQNLSLHQD
LTMDQKISPVKSQKNQRLSMLLQMSNKSLESHAETSSKVDELQSFEGNFNLQLEDSASDM
FPEEESESIVGISGFQLEIDVSLNADDKPSVTGAVEQNGADVHVNSPVSEADGTVDNSFI
TFKKKKREALIYNSEEDDIDEDERPHLMNKKLDEEFHGIGSSTPKSVKSGSISFKTRKSF
GVNTSVASRRSFVDSVIEHVEDLDEDMEAEVLQVHTDDASEESEVTGSCEVTGSCEASEV
TGFHESLMEEEPTGETLNTENEEESEEGASEPMHVEESEMGEEEESSLEESTGDHELASS
ERMDQCASGKDATLQTVECVNNNSDSSAMTEEKIYENHVENGKQSFSEGKLDDALNFFLK
AIDIKSGDPEIQLMTIQLYRRLGEGGKK
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggacaactcaaaacacctaattgcgaagatgtcggagaaattggagaagtcattgtca
atggacaccgaggagatggagacctaccagaggtacatcaaggatggaaaagatgctgcc
agacaaggaaatatgtcaaaatcattggaactgttcaagctggcccatgacatccaccct
agtgataaacttcggagcaggataaagaaacttcaggaggctataaaagagatgacacag
caaggctcagagagtgaggatgaagattttgtcaatgtcaacaacagtggtctaatgctt
ttcaaagaaatgtatgacaaactgtatgatcatcagcaagagggggttgcttttttgtat
ggtctccacagagatggtcgtcaaggaggaatcctagctgatgacatgggcttagggaag
acaattcaggtcatatcgtttctctctggtatgtatgatgctgacttggtaaagcatacc
ctgctcatcatgccaacctcactcatcaagaactggaccaaggaatttgccaaatggact
cctggaatgagagtcaaagagtttcatggcacaagcaaagtggaacgcaacaggaacttg
gagaagattcaaagaagaggtggtgtcatcatcactacataccaaatgctgatcactaac
tgggaacttctctcgtcttacaatgggagagaattcaaatgggattatgtaatcctagat
gaggcacacaagatcaaaacctcctcaaccaagacagccaaaagtgcacatgcgattcct
gccaggaatcgtgtacttcttacaggcacccctgtacagaataacctgagagaaatgtgg
gctctttttgattttgcttgtcaaggggcgcttcttggtacttctaaaaccttcaaaaca
gagtatgaaagtcccatcacccgtgcaagagagaaggatgccaccccaggtgagaaagcc
ctggggctcaagatgtcggagaacctcatggccatcataaatccatacttcctaaggagg
acaaaggcagaagtacagagaaaaacagaaaaccgtgtgaaagcctgtgagaaggacctt
gaaaacaaagtcccaagtggtggtggtgcagaaatgccaaacctcaccaggaagaatgac
ctaatcatctggacgtacttgagctcagttcaggaggaaatctataatcagttcttatcc
ctagataacatcaaggagctgctcatgaccaccaggtcaccgttggctgaactgaatatc
ctgaagaaattgtgtgaccacccaagacttctctctgccagggctgtcgctcagttaggc
ctagaagaaggaacaagtgcaaactatcgtgatgatgaaaatgaatctgctgcacacaga
atcgacaacatatctgataaaacgttaatatcagaatctggaaagctgatgtttctcatt
gcacttttggagaggcttaaggaagaaggccatcgcacacttgttttctctcagtcaagg
aagatgttggacattcttgaacgggttctagtgaacaagtgtttcaagattgtgagactt
gatggcacagtaacacacctcacagaaagagagcggcgcatccaaatgttccagaccaac
aagcaatactcagtctttctcctaaccacccaagtgggaggagttggcatcacattgaca
gcagcaaatcgagtagttatttttgaccccagctggaatccagccactgatgcccaggct
gttgaccgggcctaccgcattggacaaatggagaacgttgtcatctacagactgatcact
tgtggcacagtggaggagaagatctacagacggcaggtgttcaaagactccttgatcaga
cagaccaccggggacaagaaaaatccattccggtacttcagcaaacaagacctgaaagaa
ctcttcacactacaagacactcgatcttcatcaacacagctgcagctgcagtcactgcat
tcgagacaaagactcacagatcctaaattggatgaacacatcgcttaccttcactccatg
gagatgtttggaatatctgatcatgacctcatgttctcgcatgaagtagaaaacaacgaa
gatgaccctgaggatcaggaagctcacaagtacatagagaacagggtgcagaaagctcag
gagctgatgaaggcggagtctgagttgcaacagcagcttgctgagagcattgagtcaaac
accgagccggtacatctgcggaaaccccctcaacacaatacaatggggtcaactaagaag
aagccaaatgatgaaaagcccagcccctcctatcctagccataacctcaacttcaactct
cctgtgttggtggatcttacccattctgggtctagtgacgaggaagatatccacaatctg
agtaacaaattcattgatctagctgtagatgaaagcattgagattacagagcccactgtg
acatttgcgactgaggaacagttcataaagagcaaccatctttgtcccatagatgagtct
cttgaggtgttattggatggtgagccaatttacacttccactcaagagattttggatgtg
tcatcagaagcgaaagaggatgttgttgccataggatatgttacctctgaagttgaacaa
gacaaccagccaaatggcaatggttccccacaatggcagaacttgtcacttcaccaagac
ttgacaatggaccaaaagatctcacctgtcaaatcccagaagaatcaaagactttctatg
ctactacagatgtccaacaagagcctagaaagtcatgcagaaacatcctccaaagttgat
gaacttcagtcttttgaaggaaatttcaatctacagttagaggacagcgctagtgatatg
tttccagaggaggaatccgagtccatcgtgggaatttcaggtttccagctagagattgat
gtcagcttaaatgcagatgacaagccttctgtgactggagctgttgaacagaatggagca
gatgttcatgtcaattcccctgtttctgaagcagatggcactgtagataactcattcatt
actttcaagaaaaagaaaagggaagctttaatttacaatagtgaggaggatgacattgac
gaagatgagaggcctcatttgatgaacaagaaattggatgaagaattccatggtattggg
tcctccacaccaaaatcagttaaatctggatccatttcctttaaaaccagaaaaagcttt
ggagtgaacacctctgtggcctcaagacgttcctttgtggattctgtgattgagcatgta
gaggaccttgatgaggacatggaagctgaggttttacaggtgcacactgatgatgcaagt
gaggaaagtgaggtgactggatcttgtgaggtgactggatcttgtgaggcaagtgaggtg
actggatttcatgagtctctcatggaagaggaacccacaggggaaaccttaaacactgag
aacgaagaggaaagtgaggaaggtgcaagtgagccaatgcatgttgaagaatccgaaatg
ggagaggaggaagaaagttctttggaggaatctaccggtgatcatgaacttgcttctagt
gaaagaatggatcaatgtgccagtggaaaagatgccacattacagactgtggaatgtgtc
aacaacaacagtgattcctcagctatgactgaagaaaagatctatgaaaaccatgtggaa
aatggaaaacaatctttctctgaggggaaacttgatgatgccttgaacttctttttgaaa
gcaattgacattaaaagtggtgatcctgaaattcagttaatgacaattcaattgtaccgt
cggctcggtgaggggggaaaaaagtga
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