Salmo salar (Atlantic salmon): 106603378
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Entry
106603378 CDS
T04363
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106603378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106603378
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106603378
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
106603378
NCBI-ProteinID:
XP_014052448
UniProt:
A0A1S3RJL3
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Position
ssa04:45675939..45700492
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AA seq
1272 aa
AA seq
DB search
MIAAQELHTEFQFPQEADTQLSSDTDLEDPDVKNAKLGKGKAVKKGKKAPGEKGKGGAAK
GAGLGRVNGHHQENGMENMTLFEVVKMGKSATQSVVDDWIESYKNDRDIALLDLINFFIQ
CSGCKGAVSAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPLWKKFKSSFCEFIGVLV
RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN
TQRQYEAERNKVMAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAE
IRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNTR
LELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLHSSDEVLTAEDCESVYHLVYSAHRP
VAVAAGEFLYKKLFSHRGPEEEGMPRRGRQSINGNLIKTTVFFFLESELHEHGAYLVDSL
WECAGELLKDWESMISLLLDEPMPGEEALTDHQETALIEIMLCAIRQACECHPPVGRGTG
KRVLTAKEKKTQLDDRTRITEIFAVALPLLLAKYSVDAEKVTNLLQLPQFFDLEIYTTGR
LEKHLESLLRQIREVVEKHTETDVLEACSMTYHALCNEEFTIFNRVDIARSQLLDELVDK
FNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFTSNYKLLNTGLQNGD
MPEQIVIHAMQCTHYVILWHLSKVSEGSSTKADMVTLRKQMRAFCLMCQSYLTSVNTTVK
EQAFTILCDALMIFSHQIVSSSREQLEALIYTPDSSLQAELLNFILDHVFIDQDDDNNST
DGQHDDEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETM
SKTRQIDKIQCAKTLILSLQQLFNEMLSDLGCNFDRSSSSFCGIKELARRFSLTFGLDQL
KTREAIAMLHKDGIEFAFKEPSPQGEGNPPLNLAFLDILSEFSSKLLRQDKKTVHLYLER
FMTFQMALQREDCWLPLISYRNSLQAGGDDDTMSVISGYSSRGSSIRSKKAKPASTGKRK
LPEAEESSSCSTDAVWMNREQNVQTPVMMPSPHLSSTVLRDPKKMRPEESYMGVYSMTSE
QQQQPPLPPQQHHQTPMDYNTQVTWMLAQRQQAEARQQQERASMQYAKMRSHMQHAIRRS
SGLMEDDEEPIVEDVMMSSEDRLEDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPSS
IMDDSVLNVSMF
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcacaggagttgcacacagagtttcagtttcctcaggaggctgacacacag
ttgtcctctgacacagaccttgaggaccccgatgtcaaaaatgcaaagcttgggaaagga
aaggctgttaagaaggggaagaaagcccccggagagaagggaaagggtggggcagcgaag
ggtgctggccttggccgggtgaatggccaccaccaggagaatgggatggagaacatgacc
ctgttcgaggtggtgaaaatggggaagagtgccacacagtctgttgttgatgactggatt
gagtcttacaagaacgatcgagatattgcactcctggacttgatcaacttcttcatccag
tgctccggctgtaaaggtgctgtcagtgcagagatgttcaggcacatgcaaaactctgag
ataatcaggaagatgactgaggagtttgatgaggacagcggggactacccgttaaccatg
gcagggccactgtggaagaagttcaagtcgagcttctgtgagtttatcggggtgctggtg
cggcagtgtcagtacagcatcatctatgacgagtacatgatggacacggttatctcactg
ctcacgggcctgtctgactcgcaggtccgagccttcagacacaccagcacactggcagcc
atgaagttgatgaccgccttggtgaacgtggctctgaacctgagcatcaacatggacaac
actcagaggcagtacgaggcagagaggaacaaggtcatggccaagagggccaacgatcgg
ctggagctccttttacagaagcgtaaagagcttcaagaaaatcaagacgaaattgaaaac
atgatgaatgcgattttcaaaggagtgtttgttcacagatatcgtgatgccatagctgaa
atccgggcaatttgcattgaggagattggggtatggatgaagatgtacagcgatgctttt
ctcaatgacagttatctgaagtatgtcggatggaccatgcatgacaagcaaggtgaagtg
cgtctcaagtgtctgactgcgctccagggcctgtactataaccgggagctcaacactcgg
ctggagcttttcaccagccgcttcaaggaccgcattgtgtcgatgactctggataaggag
tatgatgttgcagtgcaagccataaaacttctgactcttgtcttgcatagcagtgatgag
gtcctgacagcagaggactgtgagagtgtctaccatctggtctactctgctcatcgacct
gtggctgtggctgcaggagagttcctctataagaagctcttcagccatcgaggtccagag
gaggaggggatgcccaggaggggcaggcagagcatcaacgggaacctcatcaagaccacc
gtcttcttcttcctggagagtgagctccatgagcacggggcctacctggtggacagtctg
tgggagtgtgcaggggagctgctaaaagactgggagagcatgatcagcctgctgctggat
gagcccatgccaggggaggaggccctgactgaccaccaggagactgctctgatagagatc
atgctgtgtgccatccgccaggcctgtgagtgccaccctccagtgggcaggggcacaggg
aagagggtcttgacagcgaaggagaagaaaacccagctggatgaccggacgagaatcact
gagattttcgctgtggcgttgcctctgttgttggctaagtactctgttgatgctgagaag
gtgaccaacttactgcagctgccgcagttctttgacctggaaatctacaccactggtcga
ttggaaaagcacttggagtcgttgctgcgtcagatcagggaggtggtggagaagcacaca
gagactgacgtgctggaggcgtgctccatgacttaccacgctctctgcaacgaggagttc
accatcttcaacagggtggacatcgccaggtcccagctactggacgagctggtggacaag
ttcaacagactcctggaggacttcctacaggagggcgaggaaccagatgaggatgatgcc
taccaggttctgtccacactgaagaggatcactgcattccacaatgcgcatgacctctct
aaatgggacctgttcaccagcaactataagctactaaacacaggacttcagaatggagat
atgcctgagcagattgtcattcatgcaatgcagtgcacacactatgtcatcctatggcac
ctatccaaggtttcagagggcagctccacaaaggcggacatggtgaccctgaggaagcag
atgagggctttctgtctgatgtgccagagctacctcaccagtgtcaacaccaccgtcaaa
gagcaggccttcaccatcctgtgtgacgccctgatgatcttcagccaccagatcgtgtcg
tcgagccgggagcagctggaggctctgatctacacgccagactcctccctgcaggccgag
ctgctcaacttcatcctggaccacgtcttcatcgaccaggacgacgacaacaacagcaca
gatgggcagcatgatgatgaagccagtaaaatcgaggctttacacaagagacgtaacctg
ctggcagcgtactgcaaactgatcatttacaatgtagtggagatgaacactggagctgat
atcttcaagcagtacatgaggtactacaacgactatggagatatcatcaaggaaacgatg
agtaaaacaagacaaattgacaagatccagtgtgccaagaccctcattctgagtttgcag
cagcttttcaatgagatgttatctgacctcggctgcaactttgaccgctcgtcgtcgtcc
ttctgcggcattaaagaactggcccgacgtttctcgttaacctttggcctggatcagctg
aagaccagagaggctatcgccatgttacacaaggatggaatcgagtttgccttcaaggag
cccagtccgcagggagagggaaaccctcctctcaacctagccttcctggacattctcagc
gagttctcctctaaactgcttcgtcaggacaagaagactgttcacctctacctggagcgg
tttatgaccttccagatggccttgcagcgagaggactgctggctgcccctcatctcctac
aggaactccctgcaggccggaggggacgacgacaccatgtccgtcatcagcggctacagc
agccgaggttccagcatcaggagcaagaaggccaagccagccagcaccgggaagaggaaa
ctgcctgaagcagaggagagtagcagctgcagcacagacgctgtgtggatgaaccgggag
cagaatgtgcagacgccagtgatgatgccctcgccacatctcagctccactgtgctgagg
gaccccaagaaaatgaggccggaggagagttacatgggtgtctacagcatgacatccgag
cagcagcagcagccaccactgcccccccagcagcaccatcagacccccatggactacaat
acccaggtgacctggatgctagcccagagacagcaggcagaggcccggcagcagcaggag
cgagccagcatgcagtatgccaagatgaggagccacatgcagcatgcaatccgccgcagt
tcaggactcatggaggacgatgaggagccaatagtagaggatgtaatgatgtcatcagag
gaccgtttggaagatctcaacgagggcatggatttcgacactatggatattgatctgcca
ccatctaaaaatcgtagagagagatcggagctgaagcctgactactttgacccttcttcc
atcatggatgattcggttctcaatgtttcaatgttctaa
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