Salmo salar (Atlantic salmon): 106603417
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Entry
106603417 CDS
T04363
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03020
RNA polymerase
sasa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106603417
09124 Replication and repair
03420 Nucleotide excision repair
106603417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106603417
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106603417
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106603417
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106603417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
CdiI
Motif
Other DBs
NCBI-GeneID:
106603417
NCBI-ProteinID:
XP_014052571
UniProt:
A0A1S3RJY0
LinkDB
All DBs
Position
ssa04:complement(54908366..54915814)
Genome browser
AA seq
110 aa
AA seq
DB search
MNAAPAFESFLLFNVFVSRMTIIKDTKVPNACLFTLNKEDHTIGIIIRQQLLKDPQVLFA
GYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVRT
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggcacctgcatttgagtcatttctgttgtttaatgtttttgtttctagaatg
acaatcatcaaggacacaaaagtccctaacgcctgcctcttcacgttgaataaagaggat
cacacaattggcatcatcatcagacaacaacttctgaaggacccccaggtgctctttgct
ggctataaggtccctcatcccctggagcacaagattgtgatccgtgttcagactacacca
gactacagtcctcaggaggctttcactaatgccatcactgacctcatcagtgagctgtcc
ttgttggaggagagatttagggtgaggacatga
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