Salmo salar (Atlantic salmon): 106603640
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Entry
106603640 CDS
T04363
Name
(RefSeq) neural cell adhesion molecule 1-like
KO
K06491
neural cell adhesion molecule
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
sasa04514
Cell adhesion molecule (CAM) interaction
sasa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
106603640
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
106603640
04517 IgSF CAM signaling
106603640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106603640
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106603640
04090 CD molecules [BR:
sasa04090
]
106603640
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
106603640
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sasa00537
]
106603640
04091 Lectins [BR:
sasa04091
]
106603640
Membrane trafficking [BR:
sasa04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
106603640
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
NCAM1/2
106603640
CD molecules [BR:
sasa04090
]
Proteins
106603640
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
106603640
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sasa00537
]
Others
106603640
Lectins [BR:
sasa04091
]
I-type lectins (Siglecs)
106603640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
V-set_CD47
Ig_PDGFR_d4
Ig_5
C2-set_2
C1-set
C2-set_3
VEGFR1-3_N_Ig-like
Big_10
Motif
Other DBs
NCBI-GeneID:
106603640
NCBI-ProteinID:
XP_014053011
LinkDB
All DBs
Position
ssa04:complement(56783341..57085754)
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AA seq
1132 aa
AA seq
DB search
MPDLCAVDSAAGKGLWGEGKPGRKEETAHRNFLSHCKSCVCSPESIQRELLIPWLGAHGG
SESLRGVWDSLRSPLSTGSQRAREALASLQVEITPMQGEISVGESKFFLCEVVGDAKDID
WFAPNGEKLLPNRQDIIVNRNDESSSTLTIYNADVDNAGVYKCVAKNADKESEGTVNVKI
FQKITFKNAPSPQEFNEGDDADIICDVVSSPPASIIWKHKGSKIQVTKDVRFKIMGNNHL
QIRGIKKTDEGAYTCEARVMARGEIDLKIIKVIVNVLPSIRTRQSEVNATADINQSVMLA
CDADGFPEPTVTWARNNIVLESDDKYSLNDDGSELIIKDVKKVDEGDYTCIARNKAGEKE
EEVSLNVFVQPKITYLDNQTASELEEQITLTCEASGDPTPTITWSFGRRFFTEGEQASWT
RPETFESLDGNVMVRSHARVSSLTLKYVQFTDAGQYLCTARNSIGQDQQTMYLEVRYAPK
IQGSVTVYTWERNAANISCEVLAHPGASVVWFRDGQQLPSTNTTNVKIYNTPAVSHLEVT
PDSQNDFGSYNCTATNLIGTESKEFLLIQADVPSAPAIERVEPFSSTAVVEFEEPDASGG
VAILKYRAEWRMKGQDWTGREYDAEDGLSMITIVGLKPETFYEVKMSAINGKGEGESSTP
LNFKTEPVRYTFTISSVTPTFIPSTSAALSEYAEGEPSPPKLEGKLQTMGNALKVNWIKQ
DDGGSPIKHYLIRYRAKHVSDWKPEIRLPHGSEYVVLSSLDWNTEYEVYVVAENQQGKSQ
PGTISFRTAAEPTAIPDTMTSGSGLGTGAIVGILIVVFVLLLVGVDVTCYFLNKCGFLMC
IAVNFCGKSGPGAKNKDIEEGKAAFMKDESKEPIVEVRTEDRTPNHEGGGPTEPNETTPL
TEPEPTADTTATVVDLLPSIATNSDPVTESFSTAQNSPASETTTLTSSTAAPTLAPTEAK
TAPNSTPAPIIQSSTPKASTPAAQPAAQSDVAPLVDLSETPKAMPLSDSKPATPATASLE
PAKATSNLPSAKANAVSQSQPEPVQSTPASDSQNKDLQIDCLAKDVFDTLGKSSEAPADS
TAAPAPAKDDGKIMTEDKSKAPEMETEVKKAQTEVKTIPNEAAQTNGNESKA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacctgtgtgctgttgactctgcagcagggaaaggactgtggggagaagggaag
ccggggcgaaaagaagaaacagcccaccggaactttcttagtcactgcaaatcatgtgtt
tgctccccagaaagcattcagagggaactgctcatcccttggcttggtgcccacgggggc
tctgagagcctgcggggggtctgggacagtctgcggtctccactctccacaggaagtcaa
agagccagagaagcactagcctccctgcaggtggagatcacaccgatgcaaggagagatc
agcgtgggggagtccaaattcttcctctgcgaagttgttggagacgcaaaggacattgat
tggtttgccccgaacggcgagaagctcttaccgaacagacaggacatcatcgtgaaccgc
aacgacgagtcctcgtccaccctcactatctacaatgctgatgtggacaatgccggtgtc
tacaagtgtgtggccaaaaatgcagacaaggagtctgagggcactgtcaacgtgaaaatc
ttccaaaagataaccttcaagaacgccccttccccacaggagtttaatgaaggggatgac
gctgacatcatctgtgacgtcgtcagctcgcctcccgccagcatcatctggaagcacaaa
ggctcaaagatccaggttacaaaagacgttcgatttaagatcatgggcaacaaccacctc
cagattcgaggcatcaagaaaacggatgaaggggcgtacacctgtgaggctcgtgttatg
gccaggggagagattgacctgaagatcatcaaggtcatcgtcaacgtgctacctagcatc
cgcaccaggcagtcggaggtgaatgccacggctgacatcaaccagtctgtgatgctggcc
tgtgacgctgacggcttccctgaacccacagtcacctgggcccgtaacaacattgtcctt
gaatcggacgataaatacagcttgaatgacgacggctcggagctgataataaaagatgtc
aagaaagtggatgaaggagattacacatgcatcgcccggaacaaggctggggagaaggag
gaggaagtcagcttgaatgtgttcgtgcaacccaagatcacctacctggacaatcagact
gcatcagagctggaggagcagatcaccctgacctgtgaggcctctggagaccccaccccc
accatcacctggagctttggccggaggttcttcacagagggagagcaggcttcttggact
cggcccgagacgttcgagagtcttgatgggaacgtaatggtgcgtagtcacgcacgggtg
tcctctctaaccctgaagtacgtccagttcaccgatgctggccagtacctctgcactgcc
cgcaactccattggtcaggaccagcagaccatgtacctggaagtgcgctatgctcctaag
atccagggctcagtgacggtctacacctgggaaaggaacgcagccaacatcagctgtgag
gttctggcccatccgggggcctcggtggtgtggttcagagatggccagcagctgcctagc
acgaacaccaccaacgtcaagatctacaacacaccagccgttagccacctcgaggtcacc
ccagattcccagaatgactttggaagctacaactgcacagccaccaacttaatcggaaca
gagtccaaggagttcctcctcatccaagcagatgtgccgtcggcgcccgccatcgagcgc
gtggagcctttctccagcacagccgttgtagagtttgaggagcccgatgccagcggcgga
gttgccatcctcaagtatcgggccgagtggcgcatgaagggccaagactggaccggcagg
gagtacgacgcagaggatggcctcagcatgatcaccatcgtgggcctgaagcccgagacc
ttctatgaggtcaagatgtctgccatcaacggcaagggtgagggcgagagcagcactccc
ctgaacttcaagacagagccagtccgctatactttcacaatttcgtcagtgacaccaacc
ttcattccttcaaccagtgcagcccttagtgagtatgccgaaggggagcccagtccccct
aagctggagggcaagctgcagaccatgggcaacgccctcaaggtcaactggatcaagcag
gacgatgggggctcgcccatcaaacattacctgatcagatacagggctaagcacgtttcg
gactggaagccggagatccgcctgccccatggcagtgagtacgtggtgctgagcagcctg
gactggaacacggagtatgaagtctacgtggtggccgagaaccagcagggcaagtcccag
cccggcaccatctcctttaggactgcagcagagcctaccgccatcccagacaccatgact
agtggctcaggcctgggcacgggggccatcgtggggatcctcatcgtggtctttgtgctg
ctgctggtgggcgtcgatgtgacctgctacttcctcaacaagtgtggcttcctcatgtgc
attgccgttaatttttgcggcaagtctggacctggagcaaagaacaaggacatcgaggag
ggcaaagcggcattcatgaaggacgagtcaaaggagcccatcgtggaggtgaggacagag
gaccgcacccctaaccatgaaggggggggacccacagagcccaatgagaccacccctctt
accgagcccgagcccactgctgacactactgccacggtggtggacttgctcccctctatc
gccactaactctgaccccgtcactgagagctttagcacagcccagaacagcccagctagc
gagactaccaccctcacttccagcacagctgctccaactcttgccccaaccgaggccaaa
actgcccctaatagcacccctgcccccatcatccagtccagcacgcccaaagctagcact
cccgccgctcagcctgccgcacaatctgacgtggctcccctcgtcgacctaagcgagact
ccaaaagccatgcccttgtccgactccaagcccgccacccccgcaaccgcttccttagag
ccagccaaggccacctccaacctcccctctgccaaagccaatgccgtttcacagagccag
cccgaacccgtccaaagcacccctgccagcgacagtcagaataaggacttacagatagac
tgcctggccaaggatgtgtttgatacactgggcaaaagctcagaggccccagcagactcc
actgctgctcccgcaccggccaaggacgatgggaaaatcatgacagaagataaaagtaaa
gcgccagagatggagacagaggtgaagaaagcccagaccgaggtgaagaccatccccaat
gaagctgctcagacaaacggcaacgagagcaaagcatga
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