Salmo salar (Atlantic salmon): 106603655
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Entry
106603655 CDS
T04363
Name
(RefSeq) HMG box transcription factor BBX-like
KO
K21643
HMG box transcription factor BBX
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106603655
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106603655
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
106603655
NCBI-ProteinID:
XP_014053050
UniProt:
A0A1S3RMX0
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Position
ssa04:complement(61016262..61058789)
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AA seq
878 aa
AA seq
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MKGGGRGKEPPVEVSYKRPKRKCLQWHPLLSKKALDFSEEEEEDEEELEKEPLMVRETRG
PKVPCGGPMEGEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAV
LEPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPCHTVSNTRNKVWSFPSNSPK
GCATAKKLPKTDSTPQLNFAMADPTKMGGLSMLLLAGEHALTAREISSSSSQSGATDVTK
YPDKSSLFQLAEISSSTRQPSLNDTAGKGKPLSQGDQAETWSGTSQQGKPDVPTANVKSP
LFKLAEQISSDSSQSTAPEGKQCGQSALFQLAEMCLASEAGKMETEDDTCAPHIKTETVV
EEAGDTPDLPLSFPPSSSSMPTDASLLLLSGQAGLIKKKKDASTREPAKVVDKDKSPGPG
SPKKTLNKRQSSESELESLFYTIEAVAKGAWGDAEEDMPKKKARTAAVTILVESSSPKKR
AKPKAKRPLKAKEDERKVKDKEDDGRTELPLTVETVVNPASPKTEAKEANISSSTEPTSP
SSPPHIKHKVGERELEANADGCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRGSF
RSASDEGGWTDETWAFSQMGPSNFKKLKKSKSKDETAPGLGKLEEEFEKKFNSLPQYSPL
TFDKKSTVVTKKKTDISTAPEEQPLKPAKGPSPSQKNTLFHKIVSKYKDKKEKPNTLDKD
IAMRSDSPMLDSATKAKPSPAPCATATLNPEAMGTSPSVPVGSQKRKARKSKITHLVRSA
DGRVSPAEEDKARDLTPEQDDKPLSQDTLCNETGCYSASKQEEADRSSAPEDLPAFFSLA
ALAEVAAMENIHRGQHVIGDSQKKDMAKTPVLISCADQ
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggaggaaggggtaaggagcctccagtggaggtgagctacaagcggcccaag
cgcaagtgtctacaatggcacccgctactctccaagaaggccctggacttttcggaggaa
gaagaggaggacgaagaagaactagagaaggagccattgatggtcagggagacccggggg
ccaaaggtgccatgcggggggcccatggagggggaagaggactcttcagagcagcgggcc
cgccggcccatgaatgccttcctgcttttctgcaagcgccaccgatcgctggtgaggcag
gaacaccctcgactggacaaccgcggtgccaccaagatcttggctgactggtgggccgtg
ctggagcccaaagagaaacagaagtacaccgacatggccaaggagtacaaggatgccttc
atgaaggctaacccgggctacaagtggtgccctgccaccaacaagccagtcaagagcccc
tgccacactgtcagcaacacccgcaataaagtgtggtccttcccttccaactcccctaag
ggctgtgctactgccaagaaactgcccaagactgacagcacaccacagcttaatttcgcc
atggcagatcccacgaagatgggtggcctaagcatgctactgttggctggggagcatgcc
cttactgccagagagatttcctccagctcctcacaatctggagccacagatgtcactaag
taccctgataaatcctccctattccaacttgctgagatctcttccagcacgcgtcagccc
agtttaaacgacacagctggcaaagggaagcccttgagtcagggggaccaggctgaaacg
tggtctggaacctcacagcagggaaagcctgacgtacccactgccaatgtcaagtcccct
ctttttaaactggcagagcagatctcctctgattcgagccagtcaactgcaccagaggga
aagcagtgtggccagtccgctctcttccagcttgctgagatgtgcttggcctccgaggca
gggaagatggagacagaggatgatacctgcgccccacacatcaaaactgagacagtggtc
gaggaggctggggacacccctgatcttcctctctcctttcccccgtcttcctcctccatg
ccgaccgatgctagtctcctgctgctcagcggccaagcaggcctaatcaaaaagaagaaa
gacgccagcaccagagagccggccaaagtggtggacaaagacaagagccctggtcccggc
tcgcccaaaaagaccctcaacaagcgacagtcatccgagtcggagttggagagcctcttc
tacactatcgaagccgtggctaaaggggcctggggcgacgccgaggaggatatgcccaag
aagaaggctcgcactgccgccgttaccattctggtagagtccagctcacccaaaaagagg
gccaagcccaaagccaagaggcccctgaaggctaaggaagatgagagaaaggtgaaggac
aaagaggacgacggacgcacagagcttccattgacagtggagacggtggtgaatccagca
agccccaagacagaggctaaggaggccaatattagcagcagcacggagcccacctcccct
tccagccccccgcacatcaagcacaaagtcggggagagggaactggaggccaacgcagat
gggtgtggctccagaaagtctgagagaagctgcaagggggcgctgtacaagaccctggtg
tcggaagggatgctgacctcactgagggccaacgtggacagaggcaaaagaggttctttt
cgaagtgcatctgatgaaggaggctggactgacgagacctgggctttctcacagatggga
cccagtaatttcaagaagctaaagaagtccaaatccaaagacgagaccgcgccaggtttg
gggaaactagaggaggagtttgagaagaagttcaacagcctgccgcagtacagccctctg
acattcgacaaaaagagcaccgtcgtcaccaagaagaaaactgacattagcaccgcaccg
gaggaacaacctctgaaacctgccaagggtccatctccatctcagaaaaatactttattc
cacaagattgttagcaagtacaaggacaaaaaggagaagcccaatactttggataaagac
atagcgatgcgtagtgactcccccatgttagactcggccaccaaggcaaagccgagccca
gccccctgtgccaccgccacgctgaacccagaagccatgggaactagccctagcgtgcca
gtgggcagccagaaaaggaaggccaggaagagcaagatcacccacctggtgcgctcggcc
gacggcagggtgtccccagccgaagaggacaaagccagggacctgaccccggagcaggat
gacaagccattatcccaagatactttatgcaatgaaacagggtgttacagcgcatccaag
caagaggaggcggacaggagcagtgcacccgaagacctgcctgccttctttagcctggct
gcccttgcagaggtggcagccatggagaacattcacagaggccagcatgtgattggtgac
agccagaagaaggacatggccaagacccctgtgctcatctcctgcgctgaccaatga
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