Salmo salar (Atlantic salmon): 106603764
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Entry
106603764 CDS
T04363
Symbol
rexo2, ORN
Name
(RefSeq) RNA exonuclease 2
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106603764 (rexo2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106603764 (rexo2)
03009 Ribosome biogenesis [BR:
sasa03009
]
106603764 (rexo2)
Messenger RNA biogenesis [BR:
sasa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
106603764 (rexo2)
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
Pre-60S particles
RNases
106603764 (rexo2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
EncFtn-like
Motif
Other DBs
NCBI-GeneID:
106603764
NCBI-ProteinID:
XP_014053293
UniProt:
A0A1S3RM03
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Position
ssa04:66834719..66856169
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AA seq
289 aa
AA seq
DB search
MPAFLCTRASAWSFSSKLLCKFANFPTLRPSSSQRFSPSRHLFLQSSTSRNCAYSSVQRK
GQASKRTGLNIFVDNISTYRKKMSSSRSDPGMRQRMVWVDLEMTGLDIEKDQIIEMACII
TDSELNVLSEGPNLIINTTSELLDGMDDWCKEHHGNSGLTQAVRDSKISLQQAEYEFLSF
IRQHTPPGHCPLAGNSVHADKKFLDKYMPQFMHHLHYRIIDVSTIKELCRRWFPEEYKLA
PQKKASHRALDDIQESIKELHFYRAHVFKSQTEEKKRKILQNCDSNKSV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgttcttgtgcactcgagcatcagcgtggtctttcagctcgaaacttctttgc
aagtttgcgaattttcctactcttcgcccaagcagcagtcaaaggttttcacccagtcga
catttatttttgcagtcaagcacaagtcggaactgcgcttatagttctgtgcagaggaaa
ggccaagcgtcgaaacggaccgggctgaatatttttgtagataatatctccacttaccgc
aagaaaatgtcatcttcgcggtcagaccctggaatgaggcagaggatggtgtgggtggac
ttggagatgacaggactggacatagagaaggaccagatcattgagatggcgtgcatcata
acagattcagaattaaatgttttatctgagggtcccaatttgataatcaacacaaccagc
gaactgctggacgggatggacgactggtgtaaagaacatcatggcaattctgggttgaca
caggcagtgagggacagtaagatctcgctgcagcaggctgagtacgagttcctctctttc
atcagacagcacaccccaccgggccactgtccccttgcagggaactctgtgcacgctgac
aagaagttcctggacaagtacatgccccagttcatgcaccacctccactacaggatcatc
gacgtgagcacgatcaaggagctttgcagacggtggtttccagaagaatacaagctcgca
ccacagaagaaagcatctcacagagcactggatgacattcaggagagcatcaaggaactg
cacttctacagagcacacgttttcaaatcgcaaacagaggaaaagaagcgcaagatattg
caaaattgtgacagcaacaaaagtgtttga
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