Salmo salar (Atlantic salmon): 106603780
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Entry
106603780 CDS
T04363
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106603780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106603780
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106603780
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106603780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-UDP
zf-rbx1
WWE_5
Motif
Other DBs
NCBI-GeneID:
106603780
NCBI-ProteinID:
XP_014053341
UniProt:
A0A1S3RLY3
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All DBs
Position
ssa04:complement(65571811..65593263)
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AA seq
625 aa
AA seq
DB search
MATASSSCVGINGSRNGPTNSTPTLVTPGQSQPMVVVWEWQDDLGFWRPYSGQVSGYIEQ
YFSSPRGHRGGGPGSTSISLGQSDPSLSPYLIDIPSLNQFRQDTGKTRSVRRQLFAQSSG
LGSGVYWEWANDEGGWTPYETRTSILLEHSYLARQATADMASHGYNYIVDLTALAQVNKA
TGFRRQVRRQGNFPYPLASGASVIHSGPACSCHQCLSHSCTGPMPSRSRHSFSSGQLSRP
SFQGPSRAAGAHPTSVYSPYPRRPLSVGGMAWGGPWPPTPSASQFPGPPLSYPTSANGLS
VPAIPLQRNGSTSVSSALAGMASILMSAVGLGVRFTSAPLPHPSSAPPPPSSTSRHAGSK
THSSSSVRTAKRQHRTAPAQKPEDVIHRYMEEVASAQDEDCIICMDRLSCPSDYAVASEG
AQSIPPGAVGKFTKCGHTLHMLCMLAMYNNGTKDGSLQCPSCKTIYGEKTGTQPKGKMEI
YSIAQSLPGHPACGTIQIIYSIPPGIQGPEHPNPGQPYTCRGFPRFCFLPDNDKGRKVLE
LLKVAWTRRLIFTVGTSSTTGEPDTVVWNEIHHKTEMMSNVSGHGYPDPNYLENVLSELS
SQGVTDDCLVKQEGPSQGGASNSGL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcctctagctcctgcgtggggataaatgggtctagaaatggacccactaac
tccacaccgacattggtaacacctggacaatctcagcctatggtcgttgtatgggaatgg
caggatgatcttggcttctggcgaccatatagcggccaggtgagcggctatatcgaacaa
tacttctcctctccgcggggacacagaggtgggggtcctggctccaccagcatcagccta
ggacaatcagatcccagcttgtcgccttatctcatagacataccaagcttgaaccagttc
cgccaagatacagggaaaacgcggtctgtacgccgtcaattgtttgcccagtcctcaggc
ttgggtagcggagtatattgggagtgggcaaatgacgaaggaggatggactccatacgag
actcgcacttctattctactagaacacagctacctggcacggcaggccacggcggatatg
gcctcacacggctataactacatagtggacctcacagcgctggcccaggtcaacaaggcc
acgggcttcaggcggcaggtccgacggcagggcaacttcccctacccgctggcgtctggc
gcctccgtcatccactcgggcccagcctgctcctgccaccagtgtctgagccacagctgc
actggccccatgcccagccgctcacgccactccttctcctctgggcagctgagccggccc
agcttccagggtcccagcagggcggctggagctcaccccacctcggtgtactctccctac
cccaggaggcctctttctgtggggggcatggcgtggggtggtccctggcccccgacaccc
tccgctagtcagttccctggacctccactgtcttaccctaccagtgccaatggcttaagt
gtccctgccatccctctgcaacggaatggatccaccagtgtcagctcagcccttgcaggc
atggcctccattttgatgtcagcagtgggactcggcgtgcgcttcacgagtgcccccctc
ccgcacccctcctccgctcctcctccccccagcagcaccagcaggcacgcaggctccaaa
actcacagcagcagctcggttaggacggcaaagaggcagcacaggacagccccagcccag
aaaccagaggatgtcattcaccggtacatggaggaagtggcctctgctcaagacgaggac
tgcatcatctgtatggaccggctatcgtgtccgtcggattacgccgtggcgtccgaggga
gcacaatccatcccacccggcgctgtgggaaagttcaccaagtgtggacacaccttgcac
atgctctgcatgcttgccatgtacaacaatggaaccaaggatggcagcctccagtgcccg
tcatgcaagacaatctacggggagaagacggggacccagcccaagggcaagatggagatc
tatagtattgcacagtccctccccggccacccagcctgtggaactatccagataatttac
agcatcccccctgggatacagggtccagagcaccctaacccggggcagccatacacctgt
agaggcttccctcgcttctgcttcctcccagacaacgacaagggcagaaaggtgcttgag
ctgctgaaggtagcgtggacgcggcgcctcatcttcacagtgggcacgtctagcaccacg
ggcgagcccgacacggtggtgtggaatgagatccaccacaagactgagatgatgtccaac
gtgtcaggccacggctacccggatcccaactatctggaaaatgtgctgtccgagctgtcc
tctcagggggtaaccgacgactgcctggtcaaacaggagggcccaagccagggaggagcg
tcaaactctggactgtga
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