Salmo salar (Atlantic salmon): 106603829
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Entry
106603829 CDS
T04363
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00061
Fatty acid biosynthesis
sasa00071
Fatty acid degradation
sasa01100
Metabolic pathways
sasa01212
Fatty acid metabolism
sasa03320
PPAR signaling pathway
sasa04146
Peroxisome
sasa04216
Ferroptosis
sasa04920
Adipocytokine signaling pathway
Module
sasa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106603829
00071 Fatty acid degradation
106603829
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106603829
09143 Cell growth and death
04216 Ferroptosis
106603829
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
106603829
03320 PPAR signaling pathway
106603829
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sasa01004
]
106603829
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106603829
Enzymes [BR:
sasa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106603829
Lipid biosynthesis proteins [BR:
sasa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106603829
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of breast milk
106603829
Exosomal proteins of breast cancer cells
106603829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106603829
NCBI-ProteinID:
XP_014053481
UniProt:
A0A1S3RMB8
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All DBs
Position
ssa04:complement(69572868..69640475)
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AA seq
723 aa
AA seq
DB search
MLAFVLISGSIWIILELSSTLMERMQTQELQSSLQLPELDELNQFFRSLPISTLVGIGAL
TAVLAYWLATRPRAISPPCNLQHQSEEVAHEDGGRRSMLGDSPNNLLTHYHEDAKTMYEV
FQRGLHIAGDGPCLGSRLPDKPYKWLSYKEVTTRAEYLGSGLLSQGCTPSPDQFIGVFAQ
NRPEWIISELACYTYSMVVVPLYDTLGPDAIRYIINTADIVTVICDKPEKAQVLLGNVER
HETPGLKRIILMDPFDPALLEEGASCGVIVQSMQDVEDLGRENHRKPLPPTPEDLSIVCF
TSGTTGNPKGVMLTHGNVVADFSGFLKVTDKVIFPNQDDVLISFLPLAHMFERLIQSVVY
CHGGRIGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFSQANTPLKRWLLNFAAK
RKGAEVSRGIIRMDSLWDKIFFSKIQASLGGRLRMIVTGAAPASPTVLGFLRAALGCQVY
EAYGQTECTAGCTFTTPGDWTSGHVGAPLPCNLIKLVDVAEKNYFARKGEGEVCVKGPNV
FKGYLKDPERTAETLDTDGWLHTGDIGRWLPNGTLKIIDRKKHIFKLAQGEYISPEKIEN
IYIRCEPVTQLYVHGDSLQSCLVAIVVPDPETMPAWALKKGMEGSYRDLCKNTVLKKAIM
EDLQRLGKASGLHSFEQVKNIHIHNEQFSIQNGLLTPTLKAKRPELREFFKEKIEDLYEN
ISM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccttcgttctgatctctgggtctatctggattatattagagctgagttccacc
ctgatggagaggatgcagacccaggagctgcagagcagtctacagctgccagagctggat
gagttaaaccagttcttccgctccctgcccatctccacgctggtgggcatcggtgccctg
actgccgtgctggcctactggctggccacacggccacgtgccatctctcctccctgcaat
ctccaacaccagtctgaagaagtggcgcatgaagatgggggtcgcaggtccatgctgggg
gacagcccaaataatctgctgacacactaccacgaggatgccaaaaccatgtatgaggtg
ttccagagaggcctccacatagccggtgatggaccttgcttaggctcccggctacccgac
aagccttacaagtggctgtcctataaagaggtcacaacccgggcggagtacttggggtcg
gggctgctgagccagggctgcacgccgagcccagatcagttcatcggagtgtttgcacag
aacaggccagagtggatcatttcggagctggcctgctacacctactctatggtggtggtg
cctctgtatgacacactagggcctgatgccatacgctacatcatcaacactgcggacatc
gtcacagtaatctgtgacaagcctgagaaggcccaggtgcttttgggtaacgtggagagg
catgagacccctgggctgaagaggatcatcctgatggacccctttgaccctgccctgctg
gaggagggggcgagctgcggggtcatcgtccagtccatgcaagatgtggaggatctgggc
agagaaaaccacagaaagcccctgccacctacaccagaagacctgtccatcgtgtgcttc
accagtggtaccacaggaaacccaaagggagtcatgctgacacatgggaatgttgtggct
gatttctcaggcttcctcaaagtgacagataaagtaatatttccaaaccaagacgacgtt
cttatctccttcctgcccctggctcacatgtttgaaagactcatccagtctgtggtgtat
tgtcatggtggcaggatcgggttcttccaaggcgacatccgcctgttgtctgatgacatg
aaggccttacggcccaccatcttccctgtggtacctcgactgctcaaccgcatgtacgac
aagatattcagccaggccaacaccccattgaagcgttggctgctgaactttgcagctaag
agaaaaggggcagaggtcagcagggggatcatccgcatggacagcctgtgggataagata
ttcttcagtaagatacaggccagcctgggtgggaggttacgcatgattgtaactggagct
gctccggcctcccccactgtactggggtttctcagggctgcactgggttgtcaggtgtat
gaggcatatggccagacagagtgtactgctggctgtactttcaccactcctggagactgg
acctcaggtcatgtgggggcaccattgccatgtaacctcatcaagctggtggatgtggct
gagaagaactactttgcacgcaagggagaaggagaggtgtgtgtgaaaggacccaatgtt
ttcaagggctacctcaaagaccctgagaggactgctgaaaccctggacacagacggttgg
ctccacaccggagacatagggagatggttacctaacggtacactgaagatcattgacagg
aagaagcacatctttaagttggcccagggagagtacatctcccctgagaagatagagaac
atttacatccgctgtgagcctgtgacccagctctacgtccatggtgacagcctacagtcc
tgtctggttgccatagttgttcctgacccagagacaatgcctgcatgggctctgaagaaa
ggcatggaggggagctatcgggacctctgtaaaaatactgtcctgaagaaagccatcatg
gaagacttgcagagactgggcaaggccagtggcctccactcgtttgagcaggtgaaaaac
atccacatccacaatgagcagttctccatacagaatggcctgttgactcccacactaaaa
gcgaagagacccgagctgagggagtttttcaaggagaagatcgaagacctgtacgaaaac
atctccatgtga
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