Salmo salar (Atlantic salmon): 106603870
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Entry
106603870 CDS
T04363
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04114
Oocyte meiosis
sasa04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
106603870
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
106603870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106603870
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106603870
Factors involved in mRNA localization
Trans-acting binding proteins
106603870
mRNA cycle factors
P-body specific factors
106603870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
106603870
NCBI-ProteinID:
XP_014053549
UniProt:
A0A1S3RPB2
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All DBs
Position
ssa04:complement(72880572..72915342)
Genome browser
AA seq
726 aa
AA seq
DB search
MGDYGFGVLVQNNTGNKSAFPVRIHPHLQPPHHHQNASPSPAAFINNTTSGNGSSSGSPW
LFSATAAHSSMQDEILGSEKPKAQQQEMQETQEKQQLSPGHQESVIISELEKARSEENKV
EGSASDGSNGKEKLRLESPVLTGFDYQETSGLGTPAQSSTSSSLTGFNNWSAAISQTPST
IINEDVSFFNPAASANNGALLFQNFSHHTSPGFGGNFSPQIGPISQHHPPHPHFQHPHNQ
HQQHRRSPASPHPPPFPHRNAAFSQLPHLSNNLNKPPSPWGSYQSPSPSPSSTSWSPGGG
YGGWGGSQGREYRRGLNGGMTPLNSISPLKKTFPNNHVPSQKYSRTSPGFNPKSWMDESV
SRSDNIFPFQERTRSFDGFNMHSLENSLIDIMRAEQDTLKGRLGFTHPGGESPLPINARN
YGRRRGHSSLFPMEDGFPDDERGEQSLPGLGSPHCFPHQNGERVERYSRKVFVGGLPPDI
DEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIEACIEEDGKLY
LCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRL
YGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLD
DQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRH
ISFRWN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgggggattacgggtttggagtcttagtgcaaaacaacactggcaacaagtctgcattc
ccagttagaattcacccacatctgcaacctccacatcatcatcagaatgcgtctccaagc
cctgctgctttcataaacaataccacatctggtaatggcagtagcagtgggtcgccttgg
ctgttttcagccacagctgcccacagcagcatgcaagatgaaattcttgggtctgaaaag
cccaaagcccagcaacaggaaatgcaagaaacgcaagaaaagcaacaactgtcccctggc
caccaggagtctgtaatcatatctgagttagagaaggcgaggtccgaggagaacaaggtg
gagggcagcgcctcagatggtagcaatggaaaggagaagctgcgcctcgagtccccagta
ctgacaggcttcgactaccaagagacatcgggtcttgggactccagcccagtccagtacc
tcctcgtccctgaccggcttcaacaactggtcagcggctatttcccagacaccctccacc
atcatcaacgaggatgtcagcttcttcaacccagctgcctctgctaacaatggggccctc
ctgttccagaatttctcccaccacaccagcccaggctttgggggaaacttctccccccag
attggacccatctcccagcaccatcccccacatccacactttcagcacccacacaaccaa
caccaacagcaccgcaggtccccagccagcccccaccctcctcccttcccccataggaat
gctgcgttcagccagttgccgcatttgtccaataatctgaataaacccccgtcaccttgg
ggtagctaccaaagcccttctccctctccctcctcaacctcctggagtcctggcgggggc
tatggtggctggggaggctcccaggggcgtgagtaccgtcggggcctcaacggaggcatg
acccccctgaactccatctccccactgaagaaaaccttccccaacaaccacgtgccgtcg
cagaagtactcccgcaccagccctgggttcaaccccaaatcctggatggacgagagtgtg
agcaggagtgacaacatcttccccttccaggagcgcaccagatcctttgatggcttcaac
atgcattccctggagaactctctcattgacatcatgagggccgagcaagatactctgaaa
ggtcgcctaggattcacccatccagggggagagagtcctctgcccataaatgcaaggaat
tatgggaggcgacgaggtcactcttccctgttccccatggaggatggtttccctgacgac
gagcgtggtgagcagagcctgcctggccttggctcgccccactgcttcccccaccagaat
ggggagcgtgttgagcgttactcccgcaaggtctttgtcggtggcctcccgccagatatt
gatgaagatgaaataactgcaagtttccgtcgctttggacacctctttgtggactggcct
cacaaggcagagagcaaatcttactttcccccgaaaggttatgccttcctgctgttccag
gatgagagctctgtgcaggccctgattgaagcctgtattgaagaggacggaaagctctac
ctgtgtgtgtccagccccaccatcaaagacaagccggtccagatccgtccctggaacctg
aacgacagtgactttgtgatggacggctcccagcctctggaccccaggaagaccatcttt
gtgggtggggtgccacgccctctccgtgcagtggagctggctatgatcatggacaggctg
tatggaggcgtgtgctatgcaggcattgacacagacccggagctcaagtaccccaaggga
gcagggcgggtcgccttctctaatcagcagagctacattgctgctatcagcgctcgtttt
gtccaactgcagcatggagaaatcgataaacgggtggaagtgaagccatacgtcttggac
gaccagttgtgtgatgagtgtcagggaactcggtgcgggggcaagtttgcccctttcttc
tgcgccaacgtcacctgtctccagtattactgtgaatactgctgggcggccatccactca
cgcgctggtcgggagttccacaaaccactggtcaaggagggaggggaccggcctaggcac
atctccttccgctggaactga
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