Salmo salar (Atlantic salmon): 106604148
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Entry
106604148 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
sasa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106604148
04120 Ubiquitin mediated proteolysis
106604148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106604148
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106604148
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106604148
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
FANCL_C
Motif
Other DBs
NCBI-GeneID:
106604148
NCBI-ProteinID:
XP_014054030
UniProt:
A0A1S3RNW8
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Position
ssa05:complement(4109207..4119489)
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AA seq
628 aa
AA seq
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MVRAALVTATSLALTGAVIAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKIFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVFSLMVLLGILDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVHLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNPNQPPTPAPAQPPAPAAPANAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAPGAPGATDAPGATEAAQTQGAGTG
QSTGASTVGAAPAPGGPMPGFPFPSFPPPPFPSAPWLTMPPPPPFVSSMPPPPPALSTMS
EAELRELEQEGRRGLEARLRCLHNIHTLLDAAMLNIHHYLTTVATLTPPQSETSSAAGEA
SGSSPPSTSAETQENQENDSQSSTAAELEAVNGATGFSQPDSTTLVDSEDKRDEEEGEEV
GEDGEPNPSELRRRRLRKLETTPPPPDH
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcagccctggtgactgccaccagtctggctctgactggcgctgtgattgcc
catgcctactttctcaaacaccagttctaccccaccgtggtctacctcaccaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcctgttgggaaagttc
atgcgtaaaatcttcttcggacagctgagagctgcagagatggagcatctgatagagcga
tcctggtatgctgtcacagagacgtgtctggcctttacggtgttcagggatgacttctct
ccccgcttcgttgccctattcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggttgactttatggagagaagtcctaatatatcctgggtcttccacttcagg
gtgttctctctgatggtgttgctgggaatcctggacttcctgtttgtcaaccatgcctgt
catagtatcatcacacgaggcgcctctgtccaactagtctttggatttgagtatgccatc
ctaatgaccatggtgctcaccaccttcatcaagtacaccctccacactgttcacctccag
agtgacaacccctgggacaacaaagcagtctacatgctctacaccgagctcttcactggt
ttcatcaaggtcctcctgtacatggcgttcatgaccatcatgataaaggttcacaccttc
cccctgttcgccatccggcccatgtacctggcgatgaggcagttcaagaaagcagtaaca
gatgcaataatgtcgcggcgagccatccgcaacatgaatacactttacccagatgccact
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagaaatggtgact
ggagccaagaaacttccttgcaaccatatcttccactctagttgccttcgctcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctcgaaccccaac
cagcctcccaccccagcccctgcccagcctcctgccccagcagcacctgccaacgcccct
gtccctggtccacctgggaacgttggccctggaatgatgccccacttccccccagggctg
tttcctttctggggccccttccctggagcggccccccctgctggtgctcctggcgcccca
ggggccacagatgcccctggggctacagaggcagctcagactcagggcgctggcaccggt
cagtccactggggccagtacagtcggtgctgctcctgctccaggaggccctatgcctggg
ttccccttcccctccttcccacccccaccgttcccctcagctccatggctgactatgcca
ccacctccaccgtttgtgtcctccatgccccctcctcccccggccctgtccaccatgtca
gaggctgaactgagggagctggagcaggagggccgtagaggcctggaggccagactgcgt
tgtctccacaacatccacactctactggacgctgccatgctcaacatccaccactacctc
actaccgtcgccacgcttactcctcctcagtcagaaaccagcagtgctgctggcgaggcc
agtggatcatctcctccctccactagtgcagaaacccaggagaaccaggagaacgactct
cagagcagtacagccgctgaacttgaagctgtgaatggggccacaggtttctcccagcca
gactctaccacgctggtcgacagtgaagacaagcgggatgaagaggaaggcgaggaagtt
ggcgaagacggagagcccaacccttcagagttgaggcgccgtcgtctccgcaaactcgag
accacaccccctcctcctgaccactga
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