Salmo salar (Atlantic salmon): 106604157
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Entry
106604157 CDS
T04363
Name
(RefSeq) synaptopodin-like
KO
K21112
synaptopodin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106604157
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
106604157
NCBI-ProteinID:
XP_014054048
UniProt:
A0A1S3RP56
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Position
ssa05:complement(4707124..4750868)
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AA seq
1152 aa
AA seq
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METERGHMSVRRGVSWSPGGGRKPLQGGQSKDVDTGNRESDASWERRDYRGIKGQVTSTS
TNQLARKTNLTRSASLSEKELKEARVRSQIIAAQLTVPSGCSNSRGVQLFNRRQQRVNAF
TLESCGERTREEEREARDGNTRNNNLTWEEERGGPSEGTEKDVQLNWKNSVGTKQPLWSP
PSGSEVTGSDIMKDPGDEHIYEEVETVTQERHFQPVNERQGEEEERSGEREREEIYEDIE
GEVKDEIIPVNDNNTGSVREEVGMNRGSYTYSTAPPETRNGFHSTQGSAGEIQNGGRISM
SLSRQAPTIVNRTARPFFSPPTVQPKSPEARSPVMDNNIPPAPSYPTPTLPPASSDSTRP
LPPFTATRPVAFSPPPPPPSYPMPPLPAFPIHPPPPSQSLSSPPPMSTVMFPRSTPVPQY
NPPSTAASVPQYLPPNPPVTHNIPPPGSPRPNTFVPFTPQPIGQQNQQQLIKTGILEEGA
AAIRRSSTARKSMFTFKEKSVMAPNPELLSLVQGNDDRKKHGLHSVPDPAPEEELLALGA
EASNFLAREEVKAEAANVPEWSSCLKSSRTREPRGQHQPEQTLTNASGKGAELFAKRQSR
MEKYVVENQNVSGGGGGQMRSPSPTASLPPSWVYPSNMPGRVKAIANNTDLSARLTRTLQ
TPQPANRRPSQQASTPAPVLAEPPLENGCTKLEMDLSRHQPYQLNSSLFIFNPVQDSTST
LLSALPRGAPQPPKPLVSSEAYSRQASLPSSNPPSHNYNSLPRFRPTLSPSLQPPLGGIG
GGDYYPSQQEGTPQLRDTRITSPVSAFSPERVASPRSSVQAPRPTFSAKRAGIEPQTRKE
SPPTPTHTTPTPTRTPQFTRRFSSPEGHPTPSGVRLPTPQTTITTSSSSRPPHQGTSTPT
SPVSPPWETRCQSPAVVNQTTKPFSTASLSRPKPSTTTSPISPVSPWGSRCQSPNINQTT
KPFSTIISNSSSSRPSHQGTITSPLSPSPLSPPWGSRCQSPIVSPSPNNSKANHRLLAKN
IINAAKRKNSPSPGALSGHNLPISPLGGITTHQHHQGYDHSSSSSKPPFSPYQSRAMGCQ
SPPFASPPPTPTGVIRSPVRLYNTRSLTDSDASVESEDSGLRSPGLQRTHNTSPRGWGGS
LRVKRGSFGTDL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggagacggagaggggtcatatgtctgtgaggaggggggtaagctggagcccaggtggg
gggaggaagccccttcagggggggcagagcaaggatgtggacaccggcaacagagagagc
gatgcatcttgggagaggcgggactacagagggatcaaaggacaggtgacatcgacctcc
accaatcagctggctcggaaaaccaacctgacacgtagtgccagcctatcagagaaggag
ttgaaggaggcaagggtgaggtcacagatcatcgctgcccagctgaccgtcccgtctggc
tgctccaactcccgcggagtccagctcttcaaccgccgccagcagagagtcaacgccttc
acgctagagagctgcggggaaagaacaagggaagaggagcgagaggcgagagacggaaat
accaggaacaacaacctgacatgggaagaagagagagggggacctagtgaggggacagag
aaagacgtacaactgaactggaagaacagcgttggaacaaaacaaccactttggtcgcca
ccctctggaagtgaggtcaccggaagtgacatcatgaaggacccaggtgacgagcacatc
tacgaggaagtggaaactgtgacacaggagagacacttccagccggtgaacgagagacaa
ggggaggaggaagagaggagtggagagagagaaagagaggagatatacgaggatattgaa
ggtgaagtgaaggatgagattataccagtaaatgacaacaacactggttcagtcagagag
gaagtggggatgaataggggatcatacacatactccacagctccccctgagacccgtaat
ggcttccacagcactcagggctctgctggagagatccagaatggaggccgaatttctatg
tccctgtccagacaggcccccaccattgtcaaccggacagccagaccattcttctccccg
cccaccgtacagcccaagtccccagaggcaaggagtcccgtcatggataacaacatacct
ccagccccctcctatcctaccccaactcttcccccagcttcctcagactccactcgccct
ctccctcctttcactgccactcgccccgtagccttctcccctcctccccctcctccctca
taccccatgcctcctctcccagccttccccatccatcctcctcctccctctcagtctctc
tccagtcctccacccatgtctaccgtcatgttccctaggtctacacccgtcccccagtac
aaccctccttctacagctgcttcagttccccagtatctaccccccaaccctcctgtcacc
cacaacatccctcctccaggttcccctagacccaacacctttgtccccttcacccctcag
cctattggtcaacagaaccagcagcagctaatcaaaacgggcatcctggaggaaggggcg
gcggccatcagacgatcgtcgacggccaggaagtccatgttcacctttaaggagaagtct
gtcatggcacccaaccctgaactcctctctctggtccaggggaacgatgataggaagaag
cacggcctccactccgttcccgacccagccccagaggaggagctgctggctctgggggcc
gaggcctctaacttcctagccagggaggaggtgaaggcggaggctgccaacgtgccggag
tggtcctcctgtctcaagagctccaggaccagggagcccagggggcagcaccagccagag
cagaccctgaccaacgcatcagggaagggggccgagcttttcgctaagcgccagtccagg
atggagaagtacgtagtggagaaccagaatgtctctggtggtggaggtggtcagatgagg
tctccgtctcccaccgcgtctctgccgccatcttgggtctatccatctaatatgcctggc
cgggtcaaagctatcgctaacaacactgacctcagcgccaggctgacccggaccctccag
acccctcagcccgcgaacaggaggcccagccagcaggcttcaaccccggccccggtcctc
gcagaaccacccctggagaacggctgcaccaagctagagatggacctctccaggcaccaa
ccctaccagctcaactcctccctgttcatcttcaacccagtccaggactctaccagcacc
ctgctgagcgctctgccccgaggggcccctcaaccacccaaacccctggtctcatctgag
gcctactccaggcaggcctccctgccttcctccaaccctccatcacacaactacaacagc
ctgccccggttcaggcctaccctgtccccctcacttcagcccccattaggaggaattgga
ggtggggattactatccttcacaacaagaggggactccacagctgagggacaccaggatc
acctctcctgtctctgccttctctccggagagagtggcctctcctcggtcgagcgtccag
gcacccagacccaccttctctgccaagagggcagggatcgaaccccagacgaggaaggag
tcgcctccaactccgacccacaccacccccactcccaccaggacaccccagttcacccgt
cggttcagcagcccagagggacaccccactcccagtggggtccggctccctaccccccag
accaccatcaccacctcctcctcttccaggcccccccaccagggcacctccacacccacc
tcccctgtttccccaccctgggagacgaggtgccagtcccccgcggtggtcaaccagacc
accaaacccttctccacagcctctttatccaggcctaaaccatccactaccacctcacct
atatcgcctgtatctccctgggggtcccgctgtcaatcccctaacatcaaccagacaacc
aagcctttctccaccatcatctccaactcttcctcttccagaccctctcaccaaggcacc
attacctctcctctctccccctcacccctgtcccctccctggggttccagatgccagtct
cccattgtcagccctagccccaacaactccaaggcaaaccatcgcctgttagccaagaac
atcatcaacgcggccaaacgtaaaaacagcccgtccccaggtgctctgagcggccacaat
ctcccaatctccccactaggtggcatcactacccaccagcaccaccagggctatgaccac
agtagcagcagctccaaacccccattcagcccctaccagtccagggccatggggtgccag
tccccccccttcgccagcccacctcccacccctacaggagtgatccggtccccagtaagg
ctctacaacaccaggtccctcactgactcggatgcttcggtggagtcggaggactctggg
ctgaggtctccaggactgcagcgtacccacaacaccagtccccggggctggggcggcagc
ctgagggtgaagaggggcagttttggcaccgacctgtag
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