Salmo salar (Atlantic salmon): 106604162
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Entry
106604162 CDS
T04363
Symbol
RPB7
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03020
RNA polymerase
sasa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106604162 (RPB7)
09124 Replication and repair
03420 Nucleotide excision repair
106604162 (RPB7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106604162 (RPB7)
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106604162 (RPB7)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106604162 (RPB7)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
106604162 (RPB7)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106604162 (RPB7)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106604162 (RPB7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
106604162
NCBI-ProteinID:
XP_014054056
UniProt:
B5X965
LinkDB
All DBs
Position
ssa05:4878093..4884655
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AA seq
172 aa
AA seq
DB search
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGSMSCFISRHSIPSEMEFD
PNSNPPCYKTTDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcatatttccctggagcatgagatcctgctccaccctcggtactttggtccc
aatctcctgaacactgtgaaacagaagctcttcacagaagtggagggaacatgcacagga
aaatatgggttcgtcattgcggtgaccaccattgacaacattggtgcaggtgtcatccaa
ccaggcagaggatttgtgctttaccccgtcaagtacaaggctattgtcttccgtccattc
aaaggcgaggtggtagatgccgtggttacccaggtcaacaaagttggactgttcacagag
atcggctccatgtcctgtttcatctctcgtcactccattccctcagagatggagtttgac
cccaactcaaatcctccttgttataagaccactgatgaggacattgtaatccaacaggat
gatgagattcggttgaagatcgtgggaacaagagtggataaaaacgacatttttgctatt
ggatccctcatggatgattacctgggtcttgtcagctga
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