Salmo salar (Atlantic salmon): 106604337
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Entry
106604337 CDS
T04363
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeats 2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106604337 (sh3tc2)
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
106604337 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_8
TPR_2
SH3_9
SH3_Tf2-1
SH3_2
SH3_1
TPR_10
TPR_MalT
TPR_19
TPR_5
Motif
Other DBs
NCBI-GeneID:
106604337
NCBI-ProteinID:
XP_014054349
UniProt:
A0A1S3RRK2
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All DBs
Position
ssa05:complement(13128214..13224506)
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AA seq
1479 aa
AA seq
DB search
MTNEVTGESRQQDRDISPAELDALWREPPYTVAGTNQHFPGNDVMNPGVESGSGEVESDS
YWKRKEAFTRGSTVSLAVGERFSSDVVLVFSGRRRSGVIPDSELQEALRTRLRVVESNSQ
DVIQLFKDLSARLLSVHAEKDSFVITFKTVEEMWKFSTYLALGYVARCLENFLCDQSFWL
DTELLRDLEITVTVDEKHLATLYLGLLLQEGSFFAKALVSSAEHSDEEEEELCFRRNDLL
MVKDTGQDSHWEGTLLSTGQHGLVPVNTMQPLPYPFYQGPKPPERGQFDQPVGEVLSLQR
EDSLTILQLRAGTFYLRHTILMPWPVFNVNTRHLLQPPLLSLLPAVTGSCEAVVDHNPVG
CDELQLSRGDLIEIHGMLLRGLDLFIGTHCSTGNTGFVHKAHVKPLNAKPLDGQLVFLSE
KERVSLSQVNPCSTEPRDSGLLERLFSSDISTVYRLDRLDQSDFTYIRNQPKQEHKPPTS
AQQSIISEKSDATLPYHSSYASQNALGCGGDGELLSFSLYNTFREMNEFQEDPPLFLEEG
SWEGEESEVCDRTLTLLNMHHFQEDFLPLYDLHHSFLWLTFSGQSEEELLGHLEIVREGA
KRTGMAWAHRRACFLLGRLCAKKLKYSQARVYYEEALGVSVDGFSDLPLLIALYTNLTAV
YLKQKMAEKLPPTLEKASALLLCLPCHTFTSLDEFELLKLVLRRSVVEGDKHLEARVCYL
TASLFLLLRKIDDALPFVERLQFLTVTLSAEEGRPIAPLDLNWLLSRLYNRKYMPYLALA
SLSLDTGQDHSLQDAFHRIELFSRNSVRLNPRWKEGTSLLPAQIVVYLQQALAIAERGDD
LKTQRDLCLGLACVYQQHGALEKALPCAQQAVQTGGGINEEEGFEASVLLGWLLVLTGQP
ERAQNTLQPLLQSLQGTDSPTQRGVIHNLLALCLRQQGGIPEAGSHLHHALTISRESGNQ
RNQALALANLGCLALGVGAPTLAERFLFRSLWLFLEIWECPVDEEHVQTYLWLGRSYKDR
GRSQDARLCYEMGLLISLQARNLPSQMVVAKVLSRHYADVQLYGQSILYYEHCVSVSRDL
KDKRLEGEYLEILSSLYLSLNTEKSSRKSLDYSKQSLRISIDLGKREEESETWLQVGRIY
YLIHEDELADMYLQAAVKTALRMNDPRFAMSIYEEAGDVFFKGNRKRLASLPFYRDGSLP
FARSIRDVDSEFRLLSKLTELLMTQEEHEEALQYAILAVQISTKTGVCVNERAAYHRLAT
VYYSLEQYEMTENYYLKSLSLSPAVLQHPLEARYYTKVYCRLGDLTLHKLKDAYDSVGYF
QLAQAAALEDRANPQALYVVYMKLAEIHANHMPDPLLCQAYRDRAQSLRRELSGLGETEW
RGGDGGEGMGNLPLRLSCRNLSPRFVGPLKVLQTVNEVTYRLKLPTMPSCFPHQTMTPTS
LNLSDQTMTPTSLNLSDQTMTPTSLNLSDQTMTSTSLNL
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgaagtgacaggagagagcagacagcaggacagagacatctcccctgctgag
ctggatgcactatggagagaaccaccgtacacagtagcgggaaccaatcagcacttccca
gggaatgatgtcatgaatccaggggtggagtctgggagcggggaggtagagtcggatagt
tactggaagaggaaggaggcgttcaccagaggaagcaccgtgtcactggccgtgggagag
aggttctcctcagacgtggtgctggtgttcagcggtcggcggcgctcaggtgtaatacct
gactctgagctacaggaggcgctccgtaccagactcagggtcgtcgagagcaacagtcag
gacgtcatccagctcttcaaggacctgtctgcccgtctgctgtctgtccacgctgagaag
gacagctttgtcatcaccttcaagactgtagaggagatgtggaagttctctacctacctg
gctctaggctatgtggcgcggtgcctggagaatttcctgtgtgaccagtcgttctggctg
gacactgagctgctgagggacctggagattactgtgactgtagatgagaaacacctggcc
acactctacctgggactgctgctgcaggaggggtcgttctttgccaaggcgctggtgagc
agtgccgagcatagtgatgaggaggaggaggagctgtgtttcagacgtaacgacttgctg
atggttaaagacacggggcaggacagtcactgggagggcacccttctctccaccggacaa
cacggactagtgcctgtcaacaccatgcagccgctgccataccccttctaccaaggtcct
aagcctccagagagaggacagtttgaccagcctgtaggtgaggtcctaagcctccagaga
gaggacagtttgaccatcctacagttgagagcaggaaccttctacctacgccacactata
ctcatgccatggccagtgttcaatgtaaatactaggcatttactccaaccccctctcctc
tcccttctccctgcagtaactggttcctgtgaggctgtagtggaccataatccagtaggt
tgtgatgagctccagctgagtcgaggtgacctgattgagatacatgggatgctactccga
ggtctggacctgttcataggaacacactgctctacaggaaacactggcttcgtacacaag
gctcacgtgaagccactcaacgccaaaccactagatggacaacttgtgtttctgagtgag
aaggagcgtgtttctctgtcccaggttaacccctgcagtactgaacccagagacagtggc
ctgctagagagactcttctcctctgacatcagtactgtctacagactagatagactggat
cagtctgattttacgtacatcagaaaccaacctaaacaagagcataagccccccaccagt
gcccagcagtccatcatctcagagaagagtgatgctacactcccataccactcctcctac
gcatcccagaatgctttagggtgtggcggtgacggggagctgctgtccttcagtctgtac
aacaccttcagagagatgaacgagttccaggaagacccaccccttttcctggaggagggg
agctgggagggggaggagtcagaggtctgtgaccgcaccttgaccctgctcaacatgcat
cactttcaggaggacttcctgcccctatatgacctccaccactcattcctgtggctgacg
ttctcagggcagagtgaagaggagttactgggtcacctggagattgtcagggagggggcc
aagagaactggcatggcctgggcacaccgacgggcatgcttcctactggggaggctctgt
gccaagaagctcaagtactcccaggcccgtgtgtattacgaggaagcccttggagtctct
gtcgacggtttctctgacctccctctcctcatcgccctgtacaccaacctcacagctgtc
tacctcaaacagaagatggctgaaaagctgcccccgaccctggagaaggccagtgctctg
ctcctctgcctcccctgccacaccttcacctccctggatgagtttgagctgctgaagctg
gtgctgcggaggtctgtggtggagggggacaaacacctcgaggcacgggtctgctacctc
actgccagcctcttcctcctccttagaaagatagatgatgccctgcccttcgtagagcgt
ctccagttcctcaccgttaccctgtctgctgaggagggacgccccatcgcccccctggac
ctcaactggctcctgtcccggctctacaaccgtaaatacatgccctacctggccctggca
tcactcagcctggacactggacaggaccactcactacaggacgccttccacaggatagaa
ctgttcagcaggaactcggtgcgtctgaacccgcgatggaaagaggggacgtctcttctc
ccagcccagattgtggtgtacctgcagcaggctctggcaattgcagagcggggtgacgac
cttaagacccagagagacctatgtctgggcctggcctgtgtgtaccagcaacacggggcc
ctggagaaggccctgccctgtgcccagcaggctgtacagaccgggggaggtatcaacgag
gaggaggggtttgaggcgtcagtactgctgggatggctgttagtcctgacgggacagcct
gagagggcacagaacaccctgcagccactactacagtccctacagggaaccgacagcccg
acccagaggggagtgatccacaacctgctggctctgtgtctgcggcagcagggtggcatc
cccgaggccggcagccacctccaccatgccctcaccatctccagggagagtggcaaccag
aggaaccaggccctggccctcgccaacctgggctgcctggcactgggcgtgggggcaccc
acactggcagaacgattcctattcaggtctctgtggttgttcctggagatttgggagtgt
cccgttgacgaggagcacgtccagacctacttatggttggggcggagctacaaggacagg
gggaggagccaggatgccaggctgtgttatgagatgggcctcctcatctccctccaggcc
aggaacctacccagtcagatggtggtggctaaagtcctgagtcgtcactatgctgacgtg
cagctgtatggacagagtatcctctactatgagcactgtgtgtctgtgtccagggacctg
aaggacaagagactagagggagaatatctagagatcctcagcagcctctacctctccctc
aatactgagaaatcatcaaggaagtctctggactacagtaagcagagtctgcgtatctcc
atcgacctggggaagagagaggaagagtcagagacctggcttcaggtgggacgcatctac
tacctcatccatgaagacgaactggctgacatgtatctacaggcggcagtgaagacagcc
ctgaggatgaacgacccacgcttcgccatgagtatctacgaggaggcaggagacgtcttc
ttcaaaggcaacaggaagagactggcatcactgcccttctacagggacggcagtctcccg
tttgctcggagcattcgtgacgtcgactcagagttcagactgctgagtaaactgactgaa
ctactgatgacccaggaagaacatgaagaggctctacagtacgccattctggctgtacag
atcagcaccaaaacaggtgtgtgtgtgaacgagcgcgcagcgtaccaccgtctggctacg
gtgtactacagtctggagcagtatgagatgacagagaactactacctcaagtctctgtct
ctcagccctgctgttctgcagcaccccctggaggctagatactacaccaaggtctactgc
aggctgggggacctgaccctgcacaaactaaaggatgcctatgactcggtgggctacttt
cagctggctcaggctgctgccctggaggaccgtgccaacccacaggcactgtatgtggtc
tacatgaagctggcagagatccatgccaaccacatgccagacccactgctctgccaggct
tacagggacagggcacagagcctgaggagggaactctctgggctgggagagacggagtgg
agaggaggagacggaggggaggggatggggaacctcccactccgcctgtcctgccggaat
ctgagcccccggtttgtggggcccttgaaagtcctacagacggtcaatgaggtgacctat
cgtctaaaactccccaccatgccttcatgtttccctcatcagaccatgacccccacctcc
ctcaacctatcagatcagaccatgaccccgacatccctcaacctatcagatcagaccatg
accccgacatccctcaacctatcagatcagaccatgacctctacttccctcaacctataa
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integrated database retrieval system
